RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 AHCYL2Q96HN2 611 aaKnown RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 AMDHD1Q96NU7 426 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 TGM7Q96PF1 710 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 BBS4Q96RK4 519 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 ZNF184Q99676 751 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 NPLQ9BXD5 320 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 TMEM38AQ9H6F2 299 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 SIRT3Q9NTG7 399 aaPredicted RBP11.99□□□□□ -0.49
NELFE-209ENST00000488426 KCMF1Q9P0J7 381 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 DAPP1Q9UN19 280 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 SPACA6W5XKT8 324 aa11.99□□□□□ -0.49
NELFE-209ENST00000488426 KIF26BQ2KJY2 2108 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 PGRMC2O15173 223 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GALR3O60755 368 aaPredicted RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 TNFRSF21O75509 655 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 TIPRLO75663 272 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 RAP2AP10114 183 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 BMP2P12643 396 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 CPN2P22792 545 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 FASP25445 335 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 MLLT3P42568 568 aaPredicted RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 CRATP43155 626 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 MAGEA8P43361 318 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 LIM2P55344 173 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GFERP55789 205 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 SKP1P63208 163 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 HSPB3Q12988 150 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 PRTGQ2VWP7 1150 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GCNT6Q5T4J0 391 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 AP1ARQ63HQ0 302 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 OR52E8Q6IFG1 317 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 NIPAL1Q6NVV3 410 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GUSBP11Q6P575 273 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 PLXDC1Q8IUK5 500 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 NCSTNQ92542 709 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 UCN3Q969E3 161 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 ZNF285Q96NJ3 590 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 DPH2Q9BQC3 489 aaPredicted RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 GLIPR2Q9H4G4 154 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 CCDC86Q9H6F5 360 aaKnown RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 MAGIXQ9H6Y5 334 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 AGPAT4Q9NRZ5 378 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GPATCH2Q9NW75 528 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 ACSL6Q9UKU0 697 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 FAF1Q9UNN5 650 aaPredicted RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 PLCL2Q9UPR0 1127 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 SAMD4AQ9UPU9 718 aaKnown RBP11.98□□□□□ -0.49
NELFE-209ENST00000488426 RAXQ9Y2V3 346 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 SNX8Q9Y5X2 465 aa11.98□□□□□ -0.49
NELFE-209ENST00000488426 GLOD5A6NK44 160 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 PRKRAO75569 313 aaKnown RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 ZBTB11O95625 1053 aaPredicted RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 PNLIPP16233 465 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 CSNK2A2P19784 350 aaPredicted RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 MPIP34949 423 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 GABRA4P48169 554 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 CDK9P50750 372 aaKnown RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 NCBP2P52298 156 aaKnown RBP eCLIP11.97□□□□□ -0.492e-7■■□□□ 11.8
NELFE-209ENST00000488426 OR1D5P58170 312 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 CHRNB3Q05901 458 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 RUNX2Q13950 521 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 SPIDRQ14159 915 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 GRAMD1BQ3KR37 738 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 PERM1Q5SV97 790 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 FAM180BQ6P0A1 224 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 IZUMO2Q6UXV1 221 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 SLC30A8Q8IWU4 369 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 KBTBD2Q8IY47 623 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ARHGEF39Q8N4T4 335 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ANKFN1Q8N957 763 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 FAM181AQ8N9Y4 354 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 OR5AK3PQ8NH89 298 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 SFXN5Q8TD22 340 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 CNRIP1Q96F85 164 aaPredicted RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 SLC24A3Q9HC58 644 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 PDE7BQ9NP56 450 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 SEMA3GQ9NS98 782 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 PADI4Q9UM07 663 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 MRPS2Q9Y399 296 aaKnown RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 DTNAQ9Y4J8 743 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 MN1Q10571 1320 aaPredicted RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 SCN3AQ9NY46 2000 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 CPED1A4D0V7 1026 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 HCRTR1O43613 425 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 SERPINA1P01009 418 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 C9P02748 559 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ETFAP13804 333 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 ACADSP16219 412 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 KDELR2P33947 212 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 GPC1P35052 558 aa11.97□□□□□ -0.49
NELFE-209ENST00000488426 SNRPNP63162 240 aaKnown RBP11.97□□□□□ -0.49
NELFE-209ENST00000488426 TAF11Q15544 211 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms