RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 FAM114A2Q9NRY5 505 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ZDHHC18Q9NUE0 388 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PANK4Q9NVE7 773 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 IL20Q9NYY1 176 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 HMG20BQ9P0W2 317 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM181Q9P2C4 612 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 IL36AQ9UHA7 158 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 ITM2BQ9Y287 266 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 MTF2Q9Y483 593 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 SELENOKQ9Y6D0 94 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 COLEC10Q9Y6Z7 277 aa3.34□□□□□ -1.87
ECHDC1-217ENST00000488087 PLEKHG1Q9ULL1 1385 aa3.34□□□□□ -1.88
ECHDC1-217ENST00000488087 MYH15Q9Y2K3 1946 aa3.34□□□□□ -1.88
ECHDC1-217ENST00000488087 MLH3Q9UHC1 1453 aa3.34□□□□□ -1.88
ECHDC1-217ENST00000488087 DLC1Q96QB1 1528 aa3.34□□□□□ -1.88
ECHDC1-217ENST00000488087 FRMPD1Q5SYB0 1578 aa3.34□□□□□ -1.88
ECHDC1-217ENST00000488087 RAPGEF6Q8TEU7 1601 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ITSN1Q15811 1721 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ANKRD26Q9UPS8 1709 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 N4BP2Q86UW6 1770 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 TRAV18A0A075B6X5 111 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 IGKV3D-15A0A087WSY6 115 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 A0A0B4J203 849 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 C13orf42A0A1B0GVH6 325 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF233A6NK53 670 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SIGLEC16A6NMB1 481 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 HIP1O00291 1037 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ST8SIA3O43173 380 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 STAM2O75886 525 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 DUS4LO95620 317 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 OLFM2O95897 454 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 OAS1P00973 400 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CGAP01215 116 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 GH1P01241 217 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 IGHEP01854 428 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 YES1P07947 543 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CLTAP09496 248 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CYP2A7P20853 494 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 PIK3R1P27986 724 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SSTR1P30872 391 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 MTTPP55157 894 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 STARD6P59095 220 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 DCDC1P59894 354 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CTAG1AP78358 180 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 HPCAP84074 193 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 PLOD1Q02809 727 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 FOLH1Q04609 750 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 PPIDQ08752 370 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 RCN1Q15293 331 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 NDUFA5Q16718 116 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 WSCD2Q2TBF2 565 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CNPY1Q3B7I2 92 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 BOLA3Q53S33 107 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 IL23RQ5VWK5 629 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 OR4C11Q6IEV9 310 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 OLFM4Q6UX06 510 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 BTNL8Q6UX41 500 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CHMP1BQ7LBR1 199 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ANKRD33Q7Z3H0 272 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 IFT20Q8IY31 132 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 GPC2Q8N158 579 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 FBXL16Q8N461 479 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SFRP1Q8N474 314 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 TCEANCQ8N8B7 351 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 IPMKQ8NFU5 416 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 PSMA8Q8TAA3 256 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 EFHD2Q96C19 240 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SNRNP40Q96DI7 357 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SGF29Q96ES7 293 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CHMP6Q96FZ7 201 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 LINC00479Q96M42 142 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 TSSK2Q96PF2 358 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF317Q96PQ6 595 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 KRT12Q99456 494 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CENPKQ9BS16 269 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF350Q9GZX5 532 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 CARD9Q9H257 536 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 C10orf88Q9H8K7 445 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SRD5A3Q9H8P0 318 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 LIN28AQ9H9Z2 209 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 FAIMQ9NVQ4 179 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ADAM22Q9P0K1 906 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 XPO7Q9UIA9 1087 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 GMEB2Q9UKD1 530 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 ZMYM6O95789 1325 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 HEG1Q9ULI3 1381 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 PXDNLA1KZ92 1463 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 NEO1Q92859 1461 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 SYCP2Q9BX26 1530 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 VWDEQ8N2E2 1590 aa3.33□□□□□ -1.88
ECHDC1-217ENST00000488087 A0A0J9YVX5 310 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM149AA5PLN7 773 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PRSS46E5RG02 174 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 E5RGE8 158 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TRAFD1O14545 582 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CTDSPLO15194 276 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms