RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 STAT5AP42229 794 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 STT3AP46977 705 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ZFP36L2P47974 494 aaKnown RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 WNT3P56703 355 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 SNRPNP63162 240 aaKnown RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 MXRA7P84157 204 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 RHAGQ02094 409 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 VAC14Q08AM6 782 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ELAVL1Q15717 326 aaKnown RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 SYT16Q17RD7 645 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 VWA2Q5GFL6 755 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 LRIF1Q5T3J3 769 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 REP15Q6BDI9 236 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ANKRD26P1Q6NSI1 321 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 OR8J3Q8NGG0 315 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 OR4A15Q8NGL6 344 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 SFXN5Q8TD22 340 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 GTF2H4Q92759 462 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 RIT1Q92963 219 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ANKRD9Q96BM1 317 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CNRIP1Q96F85 164 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 IP6K3Q96PC2 410 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CRB3Q9BUF7 120 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 VN1R1Q9GZP7 353 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 C3orf14Q9HBI5 128 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ADAP2Q9NPF8 381 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 PLSCR2Q9NRY7 297 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 ARL8BQ9NVJ2 186 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 THUMPD1Q9NXG2 353 aaKnown RBP10.36□□□□□ -0.75
HDLBP-242ENST00000488013 FOXJ2Q9P0K8 574 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 PTGFRNQ9P2B2 879 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CTSFQ9UBX1 484 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 C3orf18Q9UK00 162 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CROTQ9UKG9 612 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CFL2Q9Y281 166 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 PCDHGA6Q9Y5G7 932 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CLCA3PQ9Y6N3 262 aa10.36□□□□□ -0.75
HDLBP-242ENST00000488013 CACNA1GO43497 2377 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 TCRBV16S1A1N1A0A5B0 115 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 TTC36A6NLP5 189 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 EVPLLA8MZ36 301 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 B2RBV5 119 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 IDSB3KWA1 339 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PLOD3O60568 738 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 COQ9O75208 318 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 ALOX12BO75342 701 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 CDC123O75794 336 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 IFNA16P05015 189 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 C8orf89P0DMQ9 161 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 LIPCP11150 499 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 TNNI3P19429 210 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 TCN2P20062 427 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 NT5EP21589 574 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 UQCRC2P22695 453 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PTPN4P29074 926 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 FEN1P39748 380 aaKnown RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 ID4P47928 161 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 NUDT2P50583 147 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 AP2B1P63010 937 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PSPHP78330 225 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PHC1P78364 1004 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 FOXC1Q12948 553 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SSPNQ14714 243 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SPRED3Q2MJR0 410 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SPDYE7PQ495Y7 208 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 LACTB2Q53H82 288 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 ZNF385BQ569K4 471 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 FAM198BQ6UWH4 519 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 ZNF621Q6ZSS3 439 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 DHDDSQ86SQ9 333 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 GALNT12Q8IXK2 581 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PGAM4Q8N0Y7 254 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 MMP21Q8N119 569 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 IL22RA1Q8N6P7 574 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 POU5F2Q8N7G0 328 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 OR7G1Q8NGA0 311 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 OR56A1Q8NGH5 318 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 OR14A16Q8NHC5 309 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PMEPA1Q969W9 287 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 CIDECQ96AQ7 238 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 LRRC58Q96CX6 371 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 RCN3Q96D15 328 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SPSB2Q99619 263 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 MMADHCQ9H3L0 296 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 GLIPR2Q9H4G4 154 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SPAG4Q9NPE6 437 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 ASCL3Q9NQ33 180 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 SERHLQ9NQF3 203 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 NTMQ9P121 344 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 C5AR2Q9P296 337 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 FARSAQ9Y285 508 aaKnown RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 MSRB2Q9Y3D2 182 aa10.35□□□□□ -0.75
HDLBP-242ENST00000488013 PTRH2Q9Y3E5 179 aaKnown RBP10.35□□□□□ -0.75
HDLBP-242ENST00000488013 TRABD2BA6NFA1 517 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 C9JVG2 144 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 FBP2O00757 339 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 GYG2O15488 501 aa10.34□□□□□ -0.75
HDLBP-242ENST00000488013 LDB3O75112 727 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms