RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PATE3B3GLJ2 98 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SOCS2O14508 198 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 CASC3O15234 703 aaKnown RBP8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SIGLEC6O43699 453 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 DEAF1O75398 565 aaPredicted RBP8.88□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF682O95780 498 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 FHP07954 510 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 TFPTP0C1Z6 253 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SP9P0CG40 484 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 CPMP14384 443 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 EMP3P54852 163 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SQSTM1Q13501 440 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
SF3B1-211ENST00000487698 MAPK11Q15759 364 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
SF3B1-211ENST00000487698 CRB2Q5IJ48 1285 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 TCTE1Q5JU00 501 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 NIPAL1Q6NVV3 410 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SLC23A3Q6PIS1 610 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM107Q6UX40 140 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 D2HGDHQ8N465 521 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 PACRGLQ8N7B6 248 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 Q8N9G6 341 aaPredicted RBP8.88□□□□□ -0.99
SF3B1-211ENST00000487698 OR6C4Q8NGE1 309 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 OR56A1Q8NGH5 318 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 OR10Q1Q8NGQ4 319 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 MIPOL1Q8TD10 442 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 TAMM41Q96BW9 452 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 ELP4Q96EB1 424 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 HSH2DQ96JZ2 352 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 SLC35G5Q96KT7 338 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF597Q96LX8 424 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 VCXQ9H320 206 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 NTMQ9P121 344 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 DNAJB9Q9UBS3 223 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 KLHL3Q9UH77 587 aa8.88□□□□□ -0.99
SF3B1-211ENST00000487698 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 HYKKA2RU49 373 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 FGF17O60258 216 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 NSA2O95478 260 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 MSL3P1P0C860 447 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 UQCRBP14927 111 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 AQP1P29972 269 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SOX18P35713 384 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 MC3RP41968 323 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GCGRP47871 477 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 PPM1FP49593 454 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 XKP51811 444 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SKP1P63208 163 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 HSD11B2P80365 405 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 FOLH1Q04609 750 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 NR0B2Q15466 257 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 LTB4RQ15722 352 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 NDUFA9Q16795 377 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 AMZ1Q400G9 498 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 CYBRD1Q53TN4 286 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 BHLHB9Q6PI77 547 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 FKBP9P1Q75LS8 142 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 VTCN1Q7Z7D3 282 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 KMT5CQ86Y97 462 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 NINQ8N4C6 2090 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SLC38A5Q8WUX1 472 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 TANKQ92844 425 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 C9orf16Q9BUW7 83 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 OR51I1Q9H343 314 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 IL1RAPQ9NPH3 570 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 THUMPD1Q9NXG2 353 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ANGPT4Q9Y264 503 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 AK5Q9Y6K8 562 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SEC16AO15027 2179 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 DMDP11532 3685 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 PRAMEF27A3QJZ7 478 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 C7orf72A4D263 438 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 PLOD2O00469 737 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 EMC8O43402 210 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 CHST10O43529 356 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 RASAL1O95294 804 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GPR75O95800 540 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 CER1O95813 267 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ATP1B1P05026 303 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 HMGN2P05204 90 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 IFI6P09912 130 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 HSPA13P48723 471 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 KHKP50053 298 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SELENOWP63302 87 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 KCNJ10P78508 379 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 PRR5P85299 388 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 KCNAB1Q14722 419 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 IQCCQ4KMZ1 466 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 TRIM61Q5EBN2 209 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 PERM1Q5SV97 790 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 REEP3Q6NUK4 255 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GUSBP11Q6P575 273 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ZBTB49Q6ZSB9 765 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms