RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 PRDX3P30048 256 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 PSMC2P35998 433 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 OR1D4P47884 311 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 ZFP36L2P47974 494 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 STC1P52823 247 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 POLR2LP62875 67 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 ZNF33BQ06732 778 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 PTGR1Q14914 329 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 C15orf59Q2T9L4 293 aaPredicted RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 ALG10Q5BKT4 473 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 CMPK2Q5EBM0 449 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 ALG10BQ5I7T1 473 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 FAM182AQ5T1J6 154 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MDGA2Q7Z553 956 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 EMC1Q8N766 993 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 C1orf131Q8NDD1 294 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 ANKRD20A12PQ8NF67 263 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MYRIPQ8NFW9 859 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 LMO3Q8TAP4 145 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SLC2A12Q8TD20 617 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 PIH1D2Q8WWB5 315 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 EME1Q96AY2 570 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MSI2Q96DH6 328 aaKnown RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 TBC1D31Q96DN5 1066 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SCRN2Q96FV2 425 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SCMH1Q96GD3 660 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MCCC1Q96RQ3 725 aaPredicted RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 CD180Q99467 661 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SH3GL2Q99962 352 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 TTYH2Q9BSA4 534 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 AP1M1Q9BXS5 423 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 SLC39A8Q9C0K1 460 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 CARD9Q9H257 536 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 FANCEQ9HB96 536 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 NOD2Q9HC29 1040 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 PNPLA3Q9NST1 481 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 STOX2Q9P2F5 926 aaPredicted RBP4.01□□□□□ -1.77
CNN3-206ENST00000487539 POMT2Q9UKY4 750 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 TRAF3IP3Q9Y228 551 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 DTX4Q9Y2E6 619 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MAU2Q9Y6X3 613 aa4.01□□□□□ -1.77
CNN3-206ENST00000487539 MALRD1Q5VYJ5 2156 aa4□□□□□ -1.77
CNN3-206ENST00000487539 IGHV3-20A0A0C4DH32 117 aa4□□□□□ -1.77
CNN3-206ENST00000487539 GSAPA4D1B5 854 aa4□□□□□ -1.77
CNN3-206ENST00000487539 CXorf65A6NEN9 183 aa4□□□□□ -1.77
CNN3-206ENST00000487539 GAGE12JA6NER3 117 aa4□□□□□ -1.77
CNN3-206ENST00000487539 AGAP5A6NIR3 686 aa4□□□□□ -1.77
CNN3-206ENST00000487539 VSTM2BA6NLU5 285 aa4□□□□□ -1.77
CNN3-206ENST00000487539 EIF3CLB5ME19 914 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 PSMD11O00231 422 aa4□□□□□ -1.77
CNN3-206ENST00000487539 TLX2O43763 284 aaPredicted RBP4□□□□□ -1.77
CNN3-206ENST00000487539 HS6ST1O60243 411 aa4□□□□□ -1.77
CNN3-206ENST00000487539 PALMO75781 387 aa4□□□□□ -1.77
CNN3-206ENST00000487539 PGLSO95336 258 aa4□□□□□ -1.77
CNN3-206ENST00000487539 HBQ1P09105 142 aa4□□□□□ -1.77
CNN3-206ENST00000487539 PEPDP12955 493 aa4□□□□□ -1.77
CNN3-206ENST00000487539 KRT5P13647 590 aa4□□□□□ -1.77
CNN3-206ENST00000487539 HOXB9P17482 250 aaPredicted RBP4□□□□□ -1.77
CNN3-206ENST00000487539 PAPOLAP51003 745 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 MAXP61244 160 aa4□□□□□ -1.77
CNN3-206ENST00000487539 YWHAEP62258 255 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 KLC1Q07866 573 aa4□□□□□ -1.77
CNN3-206ENST00000487539 SLC10A7Q0GE19 358 aa4□□□□□ -1.77
CNN3-206ENST00000487539 MESDQ14696 234 aa4□□□□□ -1.77
CNN3-206ENST00000487539 OR1C1Q15619 314 aa4□□□□□ -1.77
CNN3-206ENST00000487539 PDCD2Q16342 344 aaPredicted RBP4□□□□□ -1.77
CNN3-206ENST00000487539 SLC25A52Q3SY17 297 aa4□□□□□ -1.77
CNN3-206ENST00000487539 GXYLT1Q4G148 440 aa4□□□□□ -1.77
CNN3-206ENST00000487539 CCDC38Q502W7 563 aa4□□□□□ -1.77
CNN3-206ENST00000487539 HENMT1Q5T8I9 393 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 DGAT2L7PQ6IED9 249 aa4□□□□□ -1.77
CNN3-206ENST00000487539 GJB7Q6PEY0 223 aa4□□□□□ -1.77
CNN3-206ENST00000487539 WASH2PQ6VEQ5 465 aa4□□□□□ -1.77
CNN3-206ENST00000487539 C9orf47Q6ZRZ4 202 aa4□□□□□ -1.77
CNN3-206ENST00000487539 NDUFAF7Q7L592 441 aa4□□□□□ -1.77
CNN3-206ENST00000487539 IGFN1Q86VF2 1251 aa4□□□□□ -1.77
CNN3-206ENST00000487539 SAMD14Q8IZD0 417 aaPredicted RBP4□□□□□ -1.77
CNN3-206ENST00000487539 FAM185AQ8N0U4 392 aa4□□□□□ -1.77
CNN3-206ENST00000487539 RTL3Q8N8U3 475 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 MCUQ8NE86 351 aa4□□□□□ -1.77
CNN3-206ENST00000487539 VPS37AQ8NEZ2 397 aa4□□□□□ -1.77
CNN3-206ENST00000487539 ZNF397Q8NF99 534 aaPredicted RBP4□□□□□ -1.77
CNN3-206ENST00000487539 SLC22A8Q8TCC7 542 aa4□□□□□ -1.77
CNN3-206ENST00000487539 C3orf49Q96BT1 292 aa4□□□□□ -1.77
CNN3-206ENST00000487539 PIP5K1AQ99755 562 aa4□□□□□ -1.77
CNN3-206ENST00000487539 ATG10Q9H0Y0 220 aa4□□□□□ -1.77
CNN3-206ENST00000487539 DEFB127Q9H1M4 99 aa4□□□□□ -1.77
CNN3-206ENST00000487539 CUEDC2Q9H467 287 aa4□□□□□ -1.77
CNN3-206ENST00000487539 XKR8Q9H6D3 395 aa4□□□□□ -1.77
CNN3-206ENST00000487539 LRRC19Q9H756 370 aa4□□□□□ -1.77
CNN3-206ENST00000487539 IMP3Q9NV31 184 aaKnown RBP4□□□□□ -1.77
CNN3-206ENST00000487539 TAS2R14Q9NYV8 317 aa4□□□□□ -1.77
CNN3-206ENST00000487539 TAGLN3Q9UI15 199 aa4□□□□□ -1.77
CNN3-206ENST00000487539 SLC24A2Q9UI40 661 aa4□□□□□ -1.77
CNN3-206ENST00000487539 KLHL20Q9Y2M5 609 aa4□□□□□ -1.77
CNN3-206ENST00000487539 CADP27708 2225 aa3.99□□□□□ -1.77
CNN3-206ENST00000487539 IGHV1-45A0A0A0MS14 117 aa3.99□□□□□ -1.77
CNN3-206ENST00000487539 NSG1A0A0A6YYJ2 146 aa3.99□□□□□ -1.77
CNN3-206ENST00000487539 PVALEFA0A1B0GWK0 134 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms