RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 RGPD5Q99666 1765 aa3.15□□□□□ -1.91
LINC00888-204ENST00000487386 DLG5Q8TDM6 1919 aa3.15□□□□□ -1.91
LINC00888-204ENST00000487386 SBNO1A3KN83 1393 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 ARHGEF10O15013 1369 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 DOT1LQ8TEK3 1739 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 SHANK3Q9BYB0 1731 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 IGKV6D-41A0A0C4DH26 115 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 FRAT2O75474 233 aaPredicted RBP3.14□□□□□ -1.91
LINC00888-204ENST00000487386 CLN5O75503 358 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 VENTXO95231 258 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 AZU1P20160 251 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 ACKR3P25106 362 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 CCND3P30281 292 aaPredicted RBP3.14□□□□□ -1.91
LINC00888-204ENST00000487386 KCNJ1P48048 391 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 RBBP4Q09028 425 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 ZNF506Q5JVG8 444 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 NEPROQ6NW34 567 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 VITQ6UXI7 678 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 LRRC49Q8IUZ0 686 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 TBC1D10CQ8IV04 446 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 NHLRC2Q8NBF2 726 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 RNF149Q8NC42 400 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 ZNRF1Q8ND25 227 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 SEPT8Q92599 483 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 MLPHQ9BV36 600 aaPredicted RBP3.14□□□□□ -1.91
LINC00888-204ENST00000487386 NMUR1Q9HB89 426 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 CDH7Q9ULB5 785 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 TTC21BQ7Z4L5 1316 aa3.14□□□□□ -1.91
LINC00888-204ENST00000487386 INSRP06213 1382 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 PAPPAQ13219 1627 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 A0A1W2PQ72 361 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 LOC390937A0A1W2PQ73 354 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 CCDC162PA2VCL2 907 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 TRIM49BA6NDI0 452 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 OOEPA6NGQ2 149 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 M0R296 226 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 FAM200BP0CF97 657 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 RPS27AP62979 156 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 RBP5P82980 135 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 CYLC2Q14093 348 aaPredicted RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 FASTKQ14296 549 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 ECSCRQ19T08 205 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 PODNL1Q6PEZ8 512 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 ADCK1Q86TW2 530 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 CACUL1Q86Y37 369 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 C11orf53Q8IXP5 236 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 GPD1LQ8N335 351 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 ELMOD1Q8N336 334 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 SMYD1Q8NB12 490 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 AGAP11Q8TF27 550 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 PCNPQ8WW12 178 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 SNRNP40Q96DI7 357 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 CITED2Q99967 270 aaPredicted RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 THUMPD3Q9BV44 507 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 MTIF3Q9H2K0 278 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 ZNF346Q9UL40 294 aaKnown RBP3.13□□□□□ -1.91
LINC00888-204ENST00000487386 NWD2Q9ULI1 1742 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 TOGARAM1Q9Y4F4 1720 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 KIAA1217Q5T5P2 1943 aa3.13□□□□□ -1.91
LINC00888-204ENST00000487386 KDM3BQ7LBC6 1761 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 N4BP2Q86UW6 1770 aaPredicted RBP3.12□□□□□ -1.91
LINC00888-204ENST00000487386 C5P01031 1676 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 A0A1B0GTH9 108 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 SDR42E2A6NKP2 422 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 ZNF724A8MTY0 619 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 FHITP49789 147 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 ARHGAP1Q07960 439 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 BFSP1Q12934 665 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 PTK6Q13882 451 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 TMEM44Q2T9K0 475 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 RNF212Q495C1 297 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 NHLRC3Q5JS37 347 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 AGAP6Q5VW22 663 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 NUFIP2Q7Z417 695 aaKnown RBP3.12□□□□□ -1.91
LINC00888-204ENST00000487386 HIPK1Q86Z02 1210 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 HSCBQ8IWL3 235 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 KIAA0895Q8NCT3 520 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 GPR148Q8TDV2 347 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 AFAP1L1Q8TED9 768 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 RFT1Q96AA3 541 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 RUNDC3BQ96NL0 473 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 HSD17B14Q9BPX1 270 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 SLC39A8Q9C0K1 460 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 SRD5A3Q9H8P0 318 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 S100A14Q9HCY8 104 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 VPS18Q9P253 973 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 SH3GLB1Q9Y371 365 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 MRPL11Q9Y3B7 192 aaKnown RBP3.12□□□□□ -1.91
LINC00888-204ENST00000487386 MEGF6O75095 1541 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 MAP3K19Q56UN5 1328 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 UMODL1Q5DID0 1318 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 COL18A1P39060 1754 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 GLI3P10071 1580 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 KIF24Q5T7B8 1368 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 PNPLA6Q8IY17 1366 aa3.12□□□□□ -1.91
LINC00888-204ENST00000487386 ABCA7Q8IZY2 2146 aa3.11□□□□□ -1.91
LINC00888-204ENST00000487386 NCAPD2Q15021 1401 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms