RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SDCCAG8Q86SQ7 713 aaPredicted RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 CILP2Q8IUL8 1156 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 KLHDC8AQ8IYD2 350 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 PPM1NQ8N819 430 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 RDH11Q8TC12 318 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 EEF1AKMT1Q8WVE0 214 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 SLC5A11Q8WWX8 675 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 RHNO1Q9BSD3 238 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 C12orf65Q9H3J6 166 aaKnown RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 MANSC1Q9H8J5 431 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 FBXO6Q9NRD1 293 aaPredicted RBP13.71□□□□□ -0.21
U2AF1-211ENST00000486519 SYBUQ9NX95 663 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 FETUBQ9UGM5 382 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 DAPP1Q9UN19 280 aa13.71□□□□□ -0.21
U2AF1-211ENST00000486519 CADP27708 2225 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 ERI2A8K979 691 aaKnown RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 B3GALT2O43825 422 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 FGF17O60258 216 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 ENO3P13929 434 aaPredicted RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 PAMP19021 973 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 TBXA2RP21731 343 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 CASP3P42574 277 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 ZNF844Q08AG5 666 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 FUT7Q11130 342 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 CSHL1Q14406 222 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 EXOC3L2Q2M3D2 409 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 TIGD3Q6B0B8 471 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 CYB5R2Q6BCY4 276 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 TMPRSS11BQ86T26 416 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 DENND6AQ8IWF6 608 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 PRR22Q8IZ63 422 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 TRPV3Q8NET8 790 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 SGMS2Q8NHU3 365 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 SMAP2Q8WU79 429 aaPredicted RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 FIG4Q92562 907 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 UCN3Q969E3 161 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 FAR2Q96K12 515 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 WWTR1Q9GZV5 400 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 NHEJ1Q9H9Q4 299 aaPredicted RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 SERHLQ9NQF3 203 aa13.7□□□□□ -0.22
U2AF1-211ENST00000486519 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
U2AF1-211ENST00000486519 LRIT2A6NDA9 550 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 TJP3O95049 919 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 APRTP07741 180 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 OGNP20774 298 aaKnown RBP13.69□□□□□ -0.22
U2AF1-211ENST00000486519 TCEA1P23193 301 aaKnown RBP13.69□□□□□ -0.22
U2AF1-211ENST00000486519 CCND1P24385 295 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 MGAT1P26572 445 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 PGGT1BP53609 377 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 GFRA1P56159 465 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 EBPQ15125 230 aaKnown RBP13.69□□□□□ -0.22
U2AF1-211ENST00000486519 RPS6KA2Q15349 733 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 TBCELQ5QJ74 424 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 ALKBH2Q6NS38 261 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 C11orf63Q6NUN7 778 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 ANGPTL8Q6UXH0 198 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 TMEM41AQ96HV5 264 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 ZNF845Q96IR2 970 aaPredicted RBP13.69□□□□□ -0.22
U2AF1-211ENST00000486519 HS6ST2Q96MM7 605 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 TCF12Q99081 682 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 KRT12Q99456 494 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 MAPKAP1Q9BPZ7 522 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 SLC39A3Q9BRY0 314 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 NTMT1Q9BV86 223 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 PARVBQ9HBI1 364 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 CMYA5Q8N3K9 4069 aa13.69□□□□□ -0.22
U2AF1-211ENST00000486519 E7EVH7 732 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 SNX4O95219 450 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ZSCAN5DPP0CG00 497 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 GMPRP36959 345 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 PTGDSP41222 190 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 HERVK_113P63132 956 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ERVK-8P63133 956 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 KBTBD12Q3ZCT8 623 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ADAM5Q6NVV9 412 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ZNF793Q6ZN11 406 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 P4HA3Q7Z4N8 544 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 PACS2Q86VP3 889 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 TBC1D19Q8N5T2 526 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 KCNJ9Q92806 393 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 FBXW5Q969U6 566 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 TRAF4Q9BUZ4 470 aaPredicted RBP13.68□□□□□ -0.22
U2AF1-211ENST00000486519 KIFC1Q9BW19 673 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ERVK-6Q9BXR3 956 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 WWOXQ9NZC7 414 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 KLHL42Q9P2K6 505 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 ERVK-19Q9WJR5 959 aa13.68□□□□□ -0.22
U2AF1-211ENST00000486519 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
U2AF1-211ENST00000486519 H0YC42 278 aa13.67□□□□□ -0.22
U2AF1-211ENST00000486519 CLOCKO15516 846 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms