RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TNFRSF21O75509 655 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 PRKD3O94806 890 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 AIFM1O95831 613 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 UQCRBP14927 111 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF26P17031 533 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ALOX12P18054 663 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 BUD31P41223 144 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 GPR3P46089 330 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 EPHA4P54764 986 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 PPP1CAP62136 330 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 RTP5Q14D33 572 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 INTS11Q5TA45 600 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 TLDC1Q6P9B6 456 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ENPP6Q6UWR7 440 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ZBTB49Q6ZSB9 765 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF438Q7Z4V0 828 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC30A8Q8IWU4 369 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 OR4N4Q8N0Y3 316 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 PACRGLQ8N7B6 248 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 C19orf47Q8N9M1 422 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 OR5AK3PQ8NH89 298 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ZCCHC10Q8TBK6 192 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 BBS4Q96RK4 519 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 MAPKAP1Q9BPZ7 522 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 Q9H521 79 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 TMEM38AQ9H6F2 299 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 EPS8L2Q9H6S3 715 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 COQ10BQ9H8M1 238 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 C5AR2Q9P296 337 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 ACSL6Q9UKU0 697 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 SNX8Q9Y5X2 465 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 MYO1GB0I1T2 1018 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 TXNDC9O14530 226 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 CLOCKO15516 846 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 B4GAT1O43505 415 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 EIF2S1P05198 315 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 NR2F6P10588 404 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 ETFAP13804 333 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 ST6GAL1P15907 406 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 GPC1P35052 558 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 PRIM2P49643 509 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 OR1D5P58170 312 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 HSPB3Q12988 150 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 AMZ1Q400G9 498 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 SPDYE7PQ495Y7 208 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 LRRC23Q53EV4 343 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 COX20Q5RI15 118 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 TMTC4Q5T4D3 741 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 SAXO2Q658L1 398 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 PPP4R4Q6NUP7 873 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 TMEM214Q6NUQ4 689 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 IRGCQ6NXR0 463 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 RNF130Q86XS8 419 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 CSNK1A1LQ8N752 337 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 UCN3Q969E3 161 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 AMDHD1Q96NU7 426 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 CIB1Q99828 191 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 RAB33BQ9H082 229 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 GLIPR2Q9H4G4 154 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 SEMA3GQ9NS98 782 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 DKK4Q9UBT3 224 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 CES1P1Q9UKY3 287 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 RAB26Q9ULW5 256 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 MAP4K5Q9Y4K4 846 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 RP1P56715 2156 aa13.75□□□□□ -0.21
POLR2J3-204ENST00000486319 D6RAR5 112 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PGRMC2O15173 223 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SRPX2O60687 465 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PRAMEF10O60809 474 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 NUDT7P0C024 238 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CSNK2A2P19784 350 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CPN2P22792 545 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TLX1P31314 330 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 NCBP2P52298 156 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TNFRSF17Q02223 184 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 MED21Q13503 144 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 NR1D2Q14995 579 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CEBPEQ15744 281 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 DEFB134Q4QY38 66 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 C18orf63Q68DL7 685 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CBLL1Q75N03 491 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 EIF3MQ7L2H7 374 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SAMD14Q8IZD0 417 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 FAM86B1Q8N7N1 296 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TCTN2Q96GX1 697 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 EPB41L1Q9H4G0 881 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 LYRM4Q9HD34 91 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SIRT3Q9NTG7 399 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ATXN7L1Q9ULK2 861 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC22A7Q9Y694 548 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF780BQ9Y6R6 833 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 EPG5Q9HCE0 2579 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms