RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 KIAA0040Q15053 153 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 C6orf136Q5SQH8 315 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ABHD17BQ5VST6 288 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 FAM71E1Q6IPT2 247 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 TICAM1Q8IUC6 712 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 GALNT12Q8IXK2 581 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 LRRC25Q8N386 305 aaPredicted RBP11.04□□□□□ -0.64
HPS4-214ENST00000485842 ZADH2Q8N4Q0 377 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 SLC5A8Q8N695 610 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ZNF321PQ8N8H1 164 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 APCDD1LQ8NCL9 501 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 MORN4Q8NDC4 146 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 THAP3Q8WTV1 239 aaPredicted RBP11.04□□□□□ -0.64
HPS4-214ENST00000485842 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 RIT1Q92963 219 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 EGLN2Q96KS0 407 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 FCRL1Q96LA6 429 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 GIMAP4Q9NUV9 329 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 COPS7AQ9UBW8 275 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 BAIAP2L1Q9UHR4 511 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 TEKT2Q9UIF3 430 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ERVK-19Q9WJR5 959 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ENTPD4Q9Y227 616 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ZNF780BQ9Y6R6 833 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 TLN1Q9Y490 2541 aaKnown RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 HRKO00198 91 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 KLF11O14901 512 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 MAN1A2O60476 641 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 BCKDHAP12694 445 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 CD97P48960 835 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ARG2P78540 354 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 DUSP2Q05923 314 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 LTB4RQ15722 352 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 NADK2Q4G0N4 442 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ACER2Q5QJU3 275 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 IL23RQ5VWK5 629 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ANKRD26P1Q6NSI1 321 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 IKBIPQ70UQ0 350 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 BEST3Q8N1M1 668 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 LIX1Q8N485 282 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 TEX19Q8NA77 164 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 CNRIP1Q96F85 164 aaPredicted RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 SENP5Q96HI0 755 aaPredicted RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 FBXL20Q96IG2 436 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ART5Q96L15 291 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ZNF354BQ96LW1 612 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 NPAS2Q99743 824 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 BRINP2Q9C0B6 783 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 CDCP1Q9H5V8 836 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 LUZP4Q9P127 313 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ABI3Q9P2A4 366 aa11.03□□□□□ -0.64
HPS4-214ENST00000485842 ZNF223Q9UK11 482 aaPredicted RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 PPIEQ9UNP9 301 aaKnown RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 HEMK1Q9Y5R4 338 aaPredicted RBP11.03□□□□□ -0.64
HPS4-214ENST00000485842 DYTNA2CJ06 578 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 HDAC3O15379 428 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 PRKNO60260 465 aaPredicted RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 C1QL1O75973 258 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 ZFAND5O76080 213 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 CT62P0C5K7 136 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 ASMTP46597 345 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 GPR143P51810 404 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 KLRB1Q12918 225 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 MAD2L1Q13257 205 aaPredicted RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 PTGR1Q14914 329 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 MEP1AQ16819 746 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 SPRED3Q2MJR0 410 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 H3F3CQ6NXT2 135 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 HSDL2Q6YN16 418 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 RNF111Q6ZNA4 994 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 FAM47EQ6ZV65 393 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 RPS19BP1Q86WX3 136 aaKnown RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 HPS6Q86YV9 775 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 ADCY4Q8NFM4 1077 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 OR1N1Q8NGS0 311 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.02□□□□□ -0.65
HPS4-214ENST00000485842 ZNF721Q8TF20 911 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 CKAP2Q8WWK9 683 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 BBS4Q96RK4 519 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 LMF1Q96S06 567 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 AKTIPQ9H8T0 292 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 MEAF6Q9HAF1 191 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 CXorf21Q9HAI6 301 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 SLCO1B3Q9NPD5 702 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 MED4Q9NPJ6 270 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.02□□□□□ -0.65
HPS4-214ENST00000485842 STMN3Q9NZ72 180 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 EHD3Q9NZN3 535 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 EXO1Q9UQ84 846 aaKnown RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 EIF3LQ9Y262 564 aaKnown RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.65
HPS4-214ENST00000485842 CSAG2Q9Y5P2 127 aa11.02□□□□□ -0.65
HPS4-214ENST00000485842 GOLGA8QA0A0J9YX86 632 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 GOLGA8OA6NCC3 632 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 TRPC5OSA6NMA1 111 aa11.01□□□□□ -0.65
HPS4-214ENST00000485842 GABRR3A8MPY1 467 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms