RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 GALNT12Q8IXK2 581 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 AGR3Q8TD06 166 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 ASB15Q8WXK1 588 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 FBXL20Q96IG2 436 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 GAL3ST4Q96RP7 486 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 STMN4Q9H169 189 aaPredicted RBP17.78■□□□□ 0.44
SNX17-206ENST00000484886 SSU72Q9NP77 194 aaKnown RBP17.78■□□□□ 0.44
SNX17-206ENST00000484886 OLAHQ9NV23 265 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 MYOTQ9UBF9 498 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 ERVK-11Q9UQG0 969 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 DLGAP4Q9Y2H0 992 aa17.78■□□□□ 0.44
SNX17-206ENST00000484886 YARS2Q9Y2Z4 477 aaKnown RBP17.78■□□□□ 0.44
SNX17-206ENST00000484886 WDR91A4D1P6 747 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 SLC28A1O00337 649 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 CDK2AP1O14519 115 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 RGS14O43566 566 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 SEC22BO75396 215 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 RSL1D1O76021 490 aaKnown RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 ZIC2O95409 532 aaPredicted RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 PORP16435 677 aaPredicted RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 TRHRP34981 398 aaPredicted RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 FEN1P39748 380 aaKnown RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 SERPINB4P48594 390 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 HK2P52789 917 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 PMP22Q01453 160 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 MRPL49Q13405 166 aaKnown RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 SPRED3Q2MJR0 410 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 ZNF750Q32MQ0 723 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 SH2D4BQ5SQS7 431 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 BEND6Q5SZJ8 279 aaPredicted RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 SLC29A4Q7RTT9 530 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 TRIM46Q7Z4K8 759 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 DDIASQ8IXT1 998 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 CYP4Z2PQ8N1L4 340 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 ARMC10Q8N2F6 343 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 OR8K3Q8NH51 312 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 C16orf78Q8WTQ4 265 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 FAR1Q8WVX9 515 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 PGM2Q96G03 612 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 UTS2RQ9UKP6 389 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 POLR3HQ9Y535 204 aaPredicted RBP17.77■□□□□ 0.44
SNX17-206ENST00000484886 PTGDR2Q9Y5Y4 395 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 ZNF780BQ9Y6R6 833 aa17.77■□□□□ 0.44
SNX17-206ENST00000484886 RP1L1Q8IWN7 2480 aaPredicted RBP17.77■□□□□ 0.43
SNX17-206ENST00000484886 PRRC2CQ9Y520 2896 aaKnown RBP17.77■□□□□ 0.43
SNX17-206ENST00000484886 A8MVJ9 347 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 TMEM233B4DJY2 109 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 TM9SF1O15321 606 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 NEURL1O76050 574 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 CRYABP02511 175 aaKnown RBP17.76■□□□□ 0.43
SNX17-206ENST00000484886 SP1P08047 785 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 NEFHP12036 1026 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 CSNK2A2P19784 350 aaPredicted RBP17.76■□□□□ 0.43
SNX17-206ENST00000484886 GALNSP34059 522 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 SERPINB5P36952 375 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 ETV4P43268 484 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 ZNF763Q0D2J5 394 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 KANK2Q63ZY3 851 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 SLC25A25Q6KCM7 469 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 GALNTL5Q7Z4T8 443 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 FAM98AQ8NCA5 519 aaKnown RBP17.76■□□□□ 0.43
SNX17-206ENST00000484886 TAAR6Q96RI8 345 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 BRINP2Q9C0B6 783 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 CXorf21Q9HAI6 301 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 GIMAP4Q9NUV9 329 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 HPF1Q9NWY4 346 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 HEY2Q9UBP5 337 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 CES1P1Q9UKY3 287 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 TRAF6Q9Y4K3 522 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 SPENQ96T58 3664 aaKnown RBP17.76■□□□□ 0.43
SNX17-206ENST00000484886 TENM4Q6N022 2769 aa17.76■□□□□ 0.43
SNX17-206ENST00000484886 ANKUB1A6NFN9 424 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 TMEM200CA6NKL6 621 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 ZWINTO95229 277 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 IGKV3-11P04433 115 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 LINC00032P0C843 101 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 DRD2P14416 443 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 SOX3P41225 446 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 HEPACAMQ14CZ8 416 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 FAM180BQ6P0A1 224 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 GALNT18Q6P9A2 607 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 IL20RBQ6UXL0 311 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 C9orf40Q8IXQ3 194 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 CLYBLQ8N0X4 340 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 TWIST2Q8WVJ9 160 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 EXOSC8Q96B26 276 aaKnown RBP17.75■□□□□ 0.43
SNX17-206ENST00000484886 SCMH1Q96GD3 660 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 RASL10BQ96S79 203 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 PAIP2Q9BPZ3 127 aaKnown RBP17.75■□□□□ 0.43
SNX17-206ENST00000484886 LRTM1Q9HBL6 345 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 ENTPD4Q9Y227 616 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 PCDHGB6Q9Y5F9 930 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 ACTL7BQ9Y614 415 aa17.75■□□□□ 0.43
SNX17-206ENST00000484886 NME2P1O60361 137 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 OR6B1O95007 311 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 HSPA4LO95757 839 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 NME2P22392 152 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 SSTR4P31391 388 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 PTGER1P34995 402 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 GSTM5P46439 218 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms