RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 LRRC25Q8N386 305 aaPredicted RBP15.75■□□□□ 0.11
CTSA-207ENST00000484855 OR5D16Q8NGK9 328 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 OSBPL10Q9BXB5 764 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 SMURF2Q9HAU4 748 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 CD320Q9NPF0 282 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 PRDM9Q9NQV7 894 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 TMEM74BQ9NUR3 256 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 USE1Q9NZ43 259 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 IFT80Q9P2H3 777 aaPredicted RBP15.75■□□□□ 0.11
CTSA-207ENST00000484855 P2RX2Q9UBL9 471 aa15.75■□□□□ 0.11
CTSA-207ENST00000484855 EMC8O43402 210 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 TNFAIP8O95379 198 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 ALBP02768 609 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 TFPTP0C1Z6 253 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 MC3RP41968 323 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 RXRGP48443 463 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 DHPSP49366 369 aaPredicted RBP15.74■□□□□ 0.11
CTSA-207ENST00000484855 GFERP55789 205 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 PPP2R2BQ00005 443 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 ST13P4Q8IZP2 240 aaPredicted RBP15.74■□□□□ 0.11
CTSA-207ENST00000484855 OR4K14Q8NGD5 310 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 TCTN2Q96GX1 697 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 TGM7Q96PF1 710 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 ERVMER34-1Q9H9K5 563 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 C3orf14Q9HBI5 128 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 PDP2Q9P2J9 529 aa15.74■□□□□ 0.11
CTSA-207ENST00000484855 SLC28A2O43868 658 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 KIF1CO43896 1103 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 SMNDC1O75940 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTSA-207ENST00000484855 CTSBP07858 339 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 GNAO1P09471 354 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 MYF6P23409 242 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 MAGEA8P43361 318 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 ANXA11P50995 505 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 XKP51811 444 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 EPHA4P54764 986 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 LASP1Q14847 261 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 LTB4RQ15722 352 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 C6orf132Q5T0Z8 1188 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 DNAJC22Q8N4W6 341 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 SMYD1Q8NB12 490 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 OR5T3Q8NGG3 340 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 ELP4Q96EB1 424 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 FBXL20Q96IG2 436 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 ANKHQ9HCJ1 492 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 PNPLA3Q9NST1 481 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 RNF215Q9Y6U7 377 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 A0A1B0GTW7 788 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 TLCD2A6NGC4 264 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 PDE9AO76083 593 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 HMGN2P05204 90 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 TNFRSF1BP20333 461 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 DNAJA1P31689 397 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 MLLT3P42568 568 aaPredicted RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 CTSKP43235 329 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 ARHGDIAP52565 204 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 SHC2P98077 582 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 BNIP3Q12983 259 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 ZIK1Q3SY52 487 aaPredicted RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 IQCCQ4KMZ1 466 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 CA13Q8N1Q1 262 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 NUP43Q8NFH3 380 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 GEMIN6Q8WXD5 167 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 KAT2AQ92830 837 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 RDH12Q96NR8 316 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 SOX17Q9H6I2 414 aaPredicted RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 RUBCNLQ9H714 662 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 REEP1Q9H902 201 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 PRMT8Q9NR22 394 aaPredicted RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 DNAAF2Q9NVR5 837 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 LRIT1Q9P2V4 623 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 SAMHD1Q9Y3Z3 626 aaKnown RBP15.73■□□□□ 0.11
CTSA-207ENST00000484855 NINQ8N4C6 2090 aa15.73■□□□□ 0.11
CTSA-207ENST00000484855 SGK494L7N484 410 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 HS6ST1O60243 411 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 SRPX2O60687 465 aaPredicted RBP15.72■□□□□ 0.11
CTSA-207ENST00000484855 PGM3O95394 542 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 FPR1P21462 350 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 ALDH4A1P30038 563 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 PPP2R1BP30154 601 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 WDR5BQ86VZ2 330 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 ARMC8Q8IUR7 673 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 OR4N5Q8IXE1 308 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 ARL10Q8N8L6 244 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 XAGE5Q8WWM1 108 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 NCSTNQ92542 709 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 COL26A1Q96A83 441 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 YIPF4Q9BSR8 244 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 NPLQ9BXD5 320 aaPredicted RBP15.72■□□□□ 0.11
CTSA-207ENST00000484855 GABARAPL1Q9H0R8 117 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 SOHLH2Q9NX45 425 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 CLCA2Q9UQC9 943 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 DPPA5A6NC42 116 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 DPM1O60762 260 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 RDH16O75452 317 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 NR2F1P10589 423 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 GNSP15586 552 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 PRKACGP22612 351 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 OR1E2P47887 323 aa15.72■□□□□ 0.11
CTSA-207ENST00000484855 ADARB1P78563 741 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms