RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 NOX1Q9Y5S8 564 aa18.67■□□□□ 0.58
LIMS2-215ENST00000484252 KMOO15229 486 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 DNTTP04053 509 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 ACRP10323 421 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 SPNP16150 400 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 CCT3P49368 545 aaKnown RBP18.66■□□□□ 0.58
LIMS2-215ENST00000484252 TRA2BP62995 288 aaKnown RBP18.66■□□□□ 0.58
LIMS2-215ENST00000484252 COX10Q12887 443 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 NDUFA9Q16795 377 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 ADAMTSL4Q6UY14 1074 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 SLC34A3Q8N130 599 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 PROKR2Q8NFJ6 384 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 NXPE3Q969Y0 559 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 COX14Q96I36 57 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 SMURF1Q9HCE7 757 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 DNAJC27Q9NZQ0 273 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 LRRK1Q38SD2 2015 aa18.66■□□□□ 0.58
LIMS2-215ENST00000484252 RGS13O14921 159 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 SLC28A2O43868 658 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 B4GALT2O60909 372 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 SEMA7AO75326 666 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CSO75390 466 aaKnown RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 UGT2B17O75795 530 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 SOX14O95416 240 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 PSMA1P25786 263 aaKnown RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 ITGB8P26012 769 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 ARPC4P59998 168 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 ZNF91Q05481 1191 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 TCEAL5Q5H9L2 206 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CCBE1Q6UXH8 406 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CD300LDQ6UXZ3 194 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 GDPD3Q7L5L3 318 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 OR9Q1Q8NGQ5 310 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 VANGL1Q8TAA9 524 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 EXOSC8Q96B26 276 aaKnown RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 KCNS3Q9BQ31 491 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CNPPD1Q9BV87 410 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 ABCG4Q9H172 646 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 TAS2R7Q9NYW3 318 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 A0A1W2PRQ8 180 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 NDUFS4O43181 175 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CEBPBP17676 345 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 C1DQ13901 141 aaKnown RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 SLC25A30Q5SVS4 291 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CLIP4Q8N3C7 705 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 NANOGP1Q8N7R0 232 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 SETD6Q8TBK2 473 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 CUEDC1Q9NWM3 386 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 STUB1Q9UNE7 303 aa18.65■□□□□ 0.58
LIMS2-215ENST00000484252 RBMX2Q9Y388 322 aaKnown RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 DNMT3AQ9Y6K1 912 aaPredicted RBP18.65■□□□□ 0.58
LIMS2-215ENST00000484252 PRRT4C9JH25 899 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 DYRK3O43781 588 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 PPP2R1BP30154 601 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 RORCP51449 518 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 MLLT11Q13015 90 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TARDBPQ13148 414 aaKnown RBP eCLIP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 SF3B4Q15427 424 aaKnown RBP eCLIP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 GRASPQ7Z6J2 395 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 LRRTM4Q86VH4 590 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 ETFBKMTQ8IXQ9 262 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TBC1D19Q8N5T2 526 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 ING5Q8WYH8 240 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 ERLEC1Q96DZ1 483 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 SLC35G5Q96KT7 338 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TREX2Q9BQ50 279 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TSSK6Q9BXA6 273 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 RSPO3Q9BXY4 272 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 CRISPLD2Q9H0B8 497 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 EXOSC4Q9NPD3 245 aaKnown RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 LHX9Q9NQ69 397 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 NDUFB11Q9NX14 153 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 POU2F3Q9UKI9 436 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 CAB39Q9Y376 341 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 CTDSP2O14595 271 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TNFSF8P32971 234 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 FEN1P39748 380 aaKnown RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 DGKEP52429 567 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TP53BP2Q13625 1128 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 KIAA1211LQ6NV74 962 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 FAM26EQ8N5C1 309 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 OR4D11Q8NGI4 311 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 TMCO6Q96DC7 493 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 LRRC3BQ96PB8 259 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 SDHCQ99643 169 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 SPATA5L1Q9BVQ7 753 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 POLDIP3Q9BY77 421 aaKnown RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 DDX31Q9H8H2 851 aaKnown RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 NPAP1Q9NZP6 1156 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 A4GNTQ9UNA3 340 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 PRKAB1Q9Y478 270 aa18.64■□□□□ 0.57
LIMS2-215ENST00000484252 PCYT1BQ9Y5K3 369 aaPredicted RBP18.64■□□□□ 0.57
LIMS2-215ENST00000484252 NUP210Q8TEM1 1887 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-215ENST00000484252 ZNF670-ZNF695F2Z2N8 137 aa18.63■□□□□ 0.57
LIMS2-215ENST00000484252 TMPRSS11DO60235 418 aa18.63■□□□□ 0.57
LIMS2-215ENST00000484252 NME6O75414 186 aaPredicted RBP18.63■□□□□ 0.57
LIMS2-215ENST00000484252 CKMT1AP12532 417 aa18.63■□□□□ 0.57
LIMS2-215ENST00000484252 DRD2P14416 443 aa18.63■□□□□ 0.57
LIMS2-215ENST00000484252 CASP3P42574 277 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms