RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 AGR3Q8TD06 166 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 ZNF721Q8TF20 911 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 TWIST2Q8WVJ9 160 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 FBXL20Q96IG2 436 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 ART5Q96L15 291 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 UTP23Q9BRU9 249 aaKnown RBP24.8■■□□□ 1.56
SMDT1-203ENST00000484235 EBPLQ9BY08 206 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 LRTM1Q9HBL6 345 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 PCDHGA10Q9Y5H3 936 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 DOPEY2Q9Y3R5 2298 aa24.8■■□□□ 1.56
SMDT1-203ENST00000484235 IL3P08700 152 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 CPMP14384 443 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 PORP16435 677 aaPredicted RBP24.79■■□□□ 1.56
SMDT1-203ENST00000484235 ALDH9A1P49189 494 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 ABCE1P61221 599 aaKnown RBP24.79■■□□□ 1.56
SMDT1-203ENST00000484235 TUBA3CQ13748 450 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 KIAA0040Q15053 153 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 SPRED3Q2MJR0 410 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 TUBA3EQ6PEY2 450 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 ZNF321PQ8N8H1 164 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 THAP3Q8WTV1 239 aaPredicted RBP24.79■■□□□ 1.56
SMDT1-203ENST00000484235 CCT7Q99832 543 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 VIPAS39Q9H9C1 493 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 HEY2Q9UBP5 337 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 CNTRLQ7Z7A1 2325 aa24.79■■□□□ 1.56
SMDT1-203ENST00000484235 GABRR3A8MPY1 467 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 FCHO1O14526 889 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 ITM2AO43736 263 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 IGKV3-11P04433 115 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 CSNK2A2P19784 350 aaPredicted RBP24.78■■□□□ 1.56
SMDT1-203ENST00000484235 CD96P40200 585 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 WDR4P57081 412 aaKnown RBP24.78■■□□□ 1.56
SMDT1-203ENST00000484235 ZNF763Q0D2J5 394 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 INPP5JQ15735 1006 aaPredicted RBP24.78■■□□□ 1.56
SMDT1-203ENST00000484235 OR2T11Q8NH01 316 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 SUN3Q8TAQ9 357 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 ARL8AQ96BM9 186 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 CXorf21Q9HAI6 301 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.78■■□□□ 1.56
SMDT1-203ENST00000484235 NKIRAS1Q9NYS0 192 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.78■■□□□ 1.56
SMDT1-203ENST00000484235 ZNF780BQ9Y6R6 833 aa24.78■■□□□ 1.56
SMDT1-203ENST00000484235 A0A1W2PS29 197 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 PIP5K1BO14986 540 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 ERAL1O75616 437 aaKnown RBP24.77■■□□□ 1.56
SMDT1-203ENST00000484235 BGNP21810 368 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 SLC1A6P48664 564 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 RNF4P78317 190 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 STX3Q13277 289 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 ZNF267Q14586 743 aaPredicted RBP24.77■■□□□ 1.56
SMDT1-203ENST00000484235 NR6A1Q15406 480 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 OR5L2Q8NGL0 311 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.77■■□□□ 1.56
SMDT1-203ENST00000484235 CPT1CQ8TCG5 803 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 KLHL29Q96CT2 875 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 PFDN4Q9NQP4 134 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 EHD3Q9NZN3 535 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 MYOTQ9UBF9 498 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 UTS2RQ9UKP6 389 aa24.77■■□□□ 1.56
SMDT1-203ENST00000484235 POLR3HQ9Y535 204 aaPredicted RBP24.77■■□□□ 1.56
SMDT1-203ENST00000484235 SPENQ96T58 3664 aaKnown RBP24.77■■□□□ 1.56
SMDT1-203ENST00000484235 TMEM200CA6NKL6 621 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 HRKO00198 91 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 LSM1O15116 133 aaKnown RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 PRKNO60260 465 aaPredicted RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 LYPLA1O75608 230 aaPredicted RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 TRHRP34981 398 aaPredicted RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 ZNF750Q32MQ0 723 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 RPUSD3Q6P087 351 aaKnown RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 SAMD14Q8IZD0 417 aaPredicted RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 HORMAD2Q8N7B1 307 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 ZNF681Q96N22 645 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 CNPPD1Q9BV87 410 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 ZNF395Q9H8N7 513 aaPredicted RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 ANKRD10Q9NXR5 420 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 YARS2Q9Y2Z4 477 aaKnown RBP24.76■■□□□ 1.55
SMDT1-203ENST00000484235 TMED5Q9Y3A6 229 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 RAP2CQ9Y3L5 183 aa24.76■■□□□ 1.55
SMDT1-203ENST00000484235 PRAMEF2O60811 474 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 ITGA10O75578 1167 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 ATP1B1P05026 303 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 FEN1P39748 380 aaKnown RBP24.75■■□□□ 1.55
SMDT1-203ENST00000484235 CYB561P49447 251 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 HLCSP50747 726 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 ERVK-8P63133 956 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 OC90Q02509 493 aaPredicted RBP24.75■■□□□ 1.55
SMDT1-203ENST00000484235 C2orf80Q0P641 193 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 RFTN2Q52LD8 501 aaPredicted RBP24.75■■□□□ 1.55
SMDT1-203ENST00000484235 GALNT12Q8IXK2 581 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 KIRREL3Q8IZU9 778 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 CISD2Q8N5K1 135 aaKnown RBP24.75■■□□□ 1.55
SMDT1-203ENST00000484235 MGARPQ8TDB4 240 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 FCRL1Q96LA6 429 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 ATP6V1G3Q96LB4 118 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 C20orf27Q9GZN8 174 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 TRIM45Q9H8W5 580 aaPredicted RBP24.75■■□□□ 1.55
SMDT1-203ENST00000484235 MYNNQ9NPC7 610 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 ERVK-19Q9WJR5 959 aa24.75■■□□□ 1.55
SMDT1-203ENST00000484235 LRRK2Q5S007 2527 aa24.74■■□□□ 1.55
SMDT1-203ENST00000484235 DDCP20711 480 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms