RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 SOCS6O14544 535 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 NKX2-8O15522 239 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 CT62P0C5K7 136 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 SLC35E2P0CK97 266 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 TNNI3P19429 210 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 CAPN3P20807 821 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 NT5EP21589 574 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 MPIP34949 423 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 EIF2S3P41091 472 aaKnown RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 FRKP42685 505 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 STT3AP46977 705 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 NCBP2P52298 156 aaKnown RBP eCLIP13.21□□□□□ -0.38e-8■■■■□ 23.8
SRSF6-202ENST00000483871 MANFP55145 182 aaKnown RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 OR4D2P58180 307 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 SERTAD2Q14140 314 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 RCAN2Q14206 197 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 TIGD2Q4W5G0 525 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 SFT2D3Q587I9 215 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 FAM111BQ6SJ93 734 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 CPEB2Q7Z5Q1 589 aaKnown RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 PPP1R32Q7Z5V6 425 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 FITM2Q8N6M3 262 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 SIMC1Q8NDZ2 872 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 OR9A2Q8NGT5 310 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 PTPMT1Q8WUK0 201 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 SPDL1Q96EA4 605 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 ZNF764Q96H86 408 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 AMDHD1Q96NU7 426 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 DGAT2Q96PD7 388 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 OR52E6Q96RD3 313 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 WDR77Q9BQA1 342 aaPredicted RBP13.21□□□□□ -0.3
SRSF6-202ENST00000483871 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 RAXQ9Y2V3 346 aa13.21□□□□□ -0.3
SRSF6-202ENST00000483871 PCSK5Q92824 1860 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 ASPDHA6ND91 283 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 CCDC154A6NI56 674 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 HRKO00198 91 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 TAF4O00268 1085 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 OR10H2O60403 315 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 DCTN3O75935 186 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 C6orf47O95873 294 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 IL6P05231 212 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 ABCB1P08183 1280 aaPredicted RBP13.2□□□□□ -0.3
SRSF6-202ENST00000483871 KCNK10P57789 538 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 IRX1P78414 480 aaPredicted RBP13.2□□□□□ -0.3
SRSF6-202ENST00000483871 MRPS35P82673 323 aaKnown RBP13.2□□□□□ -0.3
SRSF6-202ENST00000483871 HSPB3Q12988 150 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 DPY19L1Q2PZI1 675 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 POU5F2Q8N7G0 328 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 ADAMTS17Q8TE56 1095 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 KAT2AQ92830 837 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 ERP27Q96DN0 273 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 FAM117AQ9C073 453 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
SRSF6-202ENST00000483871 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 PRSS51A0A1B0GVH4 220 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CAPN14A8MX76 684 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 C17orf105B2RV13 164 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SEC24DO94855 1032 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CPSF4O95639 269 aaKnown RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 ATP1B1P05026 303 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SNRPB2P08579 225 aaKnown RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 PRKAR1AP10644 381 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 ADSLP30566 484 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 NTSP30990 170 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 PGDP52209 483 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 HBA1P69905 142 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 MGAT2Q10469 447 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 TLR1Q15399 786 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 TRMT12Q53H54 448 aaKnown RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 PAGE3Q5JUK9 113 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CPZQ66K79 652 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SLC2A7Q6PXP3 512 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SPACA3Q8IXA5 215 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 OR11G2Q8NGC1 345 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 RIT1Q92963 219 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 ZBED6CLQ96FA7 236 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
SRSF6-202ENST00000483871 INPP5KQ9BT40 448 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 EFHD1Q9BUP0 239 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 ADAP2Q9NPF8 381 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CLCA3PQ9Y6N3 262 aa13.19□□□□□ -0.3
SRSF6-202ENST00000483871 CFLARO15519 480 aa13.18□□□□□ -0.3
SRSF6-202ENST00000483871 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
SRSF6-202ENST00000483871 IGHEP01854 428 aa13.18□□□□□ -0.3
SRSF6-202ENST00000483871 CYC1P08574 325 aa13.18□□□□□ -0.3
SRSF6-202ENST00000483871 COX6A1P12074 109 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms