RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 IGKV3-11P04433 115 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 DDX5P17844 614 aaKnown RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 DDCP20711 480 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ASMTP46597 345 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ALDH9A1P49189 494 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 MLF1P58340 268 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 RPL38P63173 70 aaKnown RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 MAD2L1Q13257 205 aaPredicted RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 SMU1Q2TAY7 513 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 NADK2Q4G0N4 442 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ATP6AP1LQ52LC2 224 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 TTMPQ5BVD1 217 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 CES4AQ5XG92 561 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 FAM71E1Q6IPT2 247 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 GALNT12Q8IXK2 581 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 LRRC34Q8IZ02 419 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 KIF2BQ8N4N8 673 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 HORMAD2Q8N7B1 307 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ZNF781Q8N8C0 355 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 MGARPQ8TDB4 240 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ZNF721Q8TF20 911 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 C19orf60Q96EN9 201 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 SENP5Q96HI0 755 aaPredicted RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 MANSC1Q9H8J5 431 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 CXorf21Q9HAI6 301 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 SLAMF7Q9NQ25 335 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 MIEF1Q9NQG6 463 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 TAS2R7Q9NYW3 318 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 HEY2Q9UBP5 337 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 ZNF223Q9UK11 482 aaPredicted RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 POLR3HQ9Y535 204 aaPredicted RBP14.53□□□□□ -0.08
RPP40-206ENST00000483546 PTGDR2Q9Y5Y4 395 aa14.53□□□□□ -0.08
RPP40-206ENST00000483546 BSNQ9UPA5 3926 aa14.52□□□□□ -0.08
RPP40-206ENST00000483546 SNNO75324 88 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 SKAP2O75563 359 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 ERAL1O75616 437 aaKnown RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 WDPCPO95876 746 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 TRHRP34981 398 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 CD97P48960 835 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 TNFSF10P50591 281 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 C2orf80Q0P641 193 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 ZNF169Q14929 603 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 CEBPEQ15744 281 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 INAQ16352 499 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 RFTN2Q52LD8 501 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 RPUSD3Q6P087 351 aaKnown RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 ZNF605Q86T29 641 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 BEST3Q8N1M1 668 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 LRRC25Q8N386 305 aaPredicted RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 OR7G1Q8NGA0 311 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 SUN3Q8TAQ9 357 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 NUBPLQ8TB37 319 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 UCN3Q969E3 161 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 PPWD1Q96BP3 646 aaKnown RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 ERP27Q96DN0 273 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 NPAS2Q99743 824 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 UTP23Q9BRU9 249 aaKnown RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 C20orf27Q9GZN8 174 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 CDCP1Q9H5V8 836 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 ENTPD4Q9Y227 616 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 YARS2Q9Y2Z4 477 aaKnown RBP14.52□□□□□ -0.09
RPP40-206ENST00000483546 PCDHGB6Q9Y5F9 930 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 CFAP46Q8IYW2 2715 aa14.52□□□□□ -0.09
RPP40-206ENST00000483546 MYOCOSA0A1B0GUC4 107 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 WASHC1A8K0Z3 465 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 GABRR3A8MPY1 467 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 SLCO1B7G3V0H7 640 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 TBX19O60806 448 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 VPS4BO75351 444 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 SLITRK5O94991 958 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 PCSK2P16519 638 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 RPL3P39023 403 aaKnown RBP14.51□□□□□ -0.09
RPP40-206ENST00000483546 HK2P52789 917 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 ERVK-8P63133 956 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 RNF4P78317 190 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 FUT7Q11130 342 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 MAP4K2Q12851 820 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 ZNF267Q14586 743 aaPredicted RBP14.51□□□□□ -0.09
RPP40-206ENST00000483546 GALNTL6Q49A17 601 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 RNF111Q6ZNA4 994 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 PRICKLE2Q7Z3G6 844 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 GPALPP1Q8IXQ4 340 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 ZNF675Q8TD23 568 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 TUBGCP3Q96CW5 907 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 MTERF3Q96E29 417 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 CNRIP1Q96F85 164 aaPredicted RBP14.51□□□□□ -0.09
RPP40-206ENST00000483546 ZNF681Q96N22 645 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 CNPPD1Q9BV87 410 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 MFRPQ9BY79 579 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 TRIM45Q9H8W5 580 aaPredicted RBP14.51□□□□□ -0.09
RPP40-206ENST00000483546 SLC35C2Q9NQQ7 365 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 MYOTQ9UBF9 498 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 ERVK-19Q9WJR5 959 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 CFL2Q9Y281 166 aa14.51□□□□□ -0.09
RPP40-206ENST00000483546 UQCRHLA0A096LP55 91 aa14.5□□□□□ -0.09
RPP40-206ENST00000483546 SLC28A2O43868 658 aa14.5□□□□□ -0.09
RPP40-206ENST00000483546 SASH3O75995 380 aa14.5□□□□□ -0.09
RPP40-206ENST00000483546 PRPS2P11908 318 aa14.5□□□□□ -0.09
RPP40-206ENST00000483546 SDC1P18827 310 aa14.5□□□□□ -0.09
RPP40-206ENST00000483546 NT5EP21589 574 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms