RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 VPS39Q96JC1 886 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ART5Q96L15 291 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 GNRHR2Q96P88 292 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 NAP1L3Q99457 506 aaPredicted RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 WDR83Q9BRX9 315 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 TMEM79Q9BSE2 394 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SORBS1Q9BX66 1292 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 PHACTR1Q9C0D0 580 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 PRDM14Q9GZV8 571 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 CNOT10Q9H9A5 744 aaKnown RBP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.74□□□□□ -0.53
TMEM54-206ENST00000482771 JKAMPQ9P055 326 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 ASIC3Q9UHC3 531 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 CHMP2BQ9UQN3 213 aa11.74□□□□□ -0.53
TMEM54-206ENST00000482771 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ANKRD33BA6NCL7 494 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CD8B2A6NJW9 211 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 WASHC1A8K0Z3 465 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 TP53I11O14683 189 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CASKO14936 926 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 HPNP05981 417 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ALOX15P16050 662 aaPredicted RBP11.73□□□□□ -0.53
TMEM54-206ENST00000482771 BMP7P18075 431 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 PCSK6P29122 969 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 FNTAP49354 379 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CDK9P50750 372 aaKnown RBP11.73□□□□□ -0.53
TMEM54-206ENST00000482771 FBXW4P57775 412 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 HERVK_113P63132 956 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ERVK-8P63133 956 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 SORDQ00796 357 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 IRF8Q02556 426 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CHIT1Q13231 466 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 NTRK2Q16620 822 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 TMEM35AQ53FP2 167 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 EIPR1Q53HC9 387 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 PAGE2BQ5JRK9 111 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 C18orf63Q68DL7 685 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 OR4C11Q6IEV9 310 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 SULT1C3Q6IMI6 304 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
TMEM54-206ENST00000482771 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CIARTQ8N365 385 aaPredicted RBP11.73□□□□□ -0.53
TMEM54-206ENST00000482771 TCAIMQ8N3R3 496 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ZNF473Q8WTR7 871 aaKnown RBP11.73□□□□□ -0.53
TMEM54-206ENST00000482771 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ZNF597Q96LX8 424 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 DACH2Q96NX9 599 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ERVK-6Q9BXR3 956 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 MS4A8Q9BY19 250 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 UGT2B28Q9BY64 529 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 WWTR1Q9GZV5 400 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 CALHM2Q9HA72 323 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 ERVK-19Q9WJR5 959 aa11.73□□□□□ -0.53
TMEM54-206ENST00000482771 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 CAPN14A8MX76 684 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 CCNT2O60583 730 aaKnown RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 SNX4O95219 450 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 GOSR1O95249 250 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 IL18BPO95998 194 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 PCNAP12004 261 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 TLX1P31314 330 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 CASP2P42575 452 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 SSR2P43308 183 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MASP1P48740 699 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 SLC37A1P57057 533 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MGAT5Q09328 741 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 FOXF2Q12947 444 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 PDK4Q16654 411 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 WIPI1Q5MNZ9 446 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 TBCELQ5QJ74 424 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 DEPDC1Q5TB30 811 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 STEAP4Q687X5 459 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 RNF111Q6ZNA4 994 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 GPR180Q86V85 440 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 C9orf106Q8NAJ2 232 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 RIT1Q92963 219 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 ABTB1Q969K4 478 aaPredicted RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 RILPQ96NA2 401 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 RBM24Q9BX46 236 aaKnown RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 DERL2Q9GZP9 239 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 OR51B5Q9H339 312 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 UBQLN3Q9H347 655 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 MS4A12Q9NXJ0 267 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 CD274Q9NZQ7 290 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 PTBP2Q9UKA9 531 aaKnown RBP11.72□□□□□ -0.53
TMEM54-206ENST00000482771 JRKLQ9Y4A0 524 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 TEX264Q9Y6I9 313 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 IKBKGQ9Y6K9 419 aa11.72□□□□□ -0.53
TMEM54-206ENST00000482771 ROS1P08922 2347 aa11.71□□□□□ -0.53
TMEM54-206ENST00000482771 C2orf92A0A1B0GVN3 265 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms