RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CDC26Q8NHZ8 85 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 RAB3IL1Q8TBN0 382 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 FBXL20Q96IG2 436 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 PPP3R2Q96LZ3 170 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 SORT1Q99523 831 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 NPAS2Q99743 824 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 C20orf27Q9GZN8 174 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 ACBD3Q9H3P7 528 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.47■□□□□ 0.71
SEC13-217ENST00000482647 EHD3Q9NZN3 535 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 ZNF223Q9UK11 482 aaPredicted RBP19.47■□□□□ 0.71
SEC13-217ENST00000482647 UTS2RQ9UKP6 389 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 DOCK10Q96BY6 2186 aa19.47■□□□□ 0.71
SEC13-217ENST00000482647 TTLL8A6PVC2 850 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 SKAP2O75563 359 aaPredicted RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 TNFSF10P50591 281 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 MLF1P58340 268 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 C2orf80Q0P641 193 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 ZNF267Q14586 743 aaPredicted RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 GALNTL6Q49A17 601 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 RFTN2Q52LD8 501 aaPredicted RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 XKR7Q5GH72 579 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 SAMD14Q8IZD0 417 aaPredicted RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 ARMC10Q8N2F6 343 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 ZNF321PQ8N8H1 164 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 CATSPER1Q8NEC5 780 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 OR5L2Q8NGL0 311 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 OR8K3Q8NH51 312 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.46■□□□□ 0.71
SEC13-217ENST00000482647 ZNF721Q8TF20 911 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 THAP3Q8WTV1 239 aaPredicted RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 UTP23Q9BRU9 249 aaKnown RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 CNPPD1Q9BV87 410 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.46■□□□□ 0.71
SEC13-217ENST00000482647 CXorf21Q9HAI6 301 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 MYNNQ9NPC7 610 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 THAP1Q9NVV9 213 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 HAO1Q9UJM8 370 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 CSAG2Q9Y5P2 127 aa19.46■□□□□ 0.71
SEC13-217ENST00000482647 TNRC6AQ8NDV7 1962 aaKnown RBP19.46■□□□□ 0.71
SEC13-217ENST00000482647 A0A1W2PS29 197 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 OR5H15A6NDH6 313 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 FCHO1O14526 889 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 MAN1A2O60476 641 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 SORBS2O94875 1100 aaKnown RBP19.45■□□□□ 0.7
SEC13-217ENST00000482647 F10P00742 488 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 DDCP20711 480 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 NT5EP21589 574 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 FEN1P39748 380 aaKnown RBP19.45■□□□□ 0.7
SEC13-217ENST00000482647 RPL38P63173 70 aaKnown RBP19.45■□□□□ 0.7
SEC13-217ENST00000482647 ZNF169Q14929 603 aaPredicted RBP19.45■□□□□ 0.7
SEC13-217ENST00000482647 ZNF750Q32MQ0 723 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 ATP6AP1LQ52LC2 224 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 C6orf163Q5TEZ5 329 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 FAM71E1Q6IPT2 247 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 GALNT12Q8IXK2 581 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 SUN3Q8TAQ9 357 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 C19orf60Q96EN9 201 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 FCRL1Q96LA6 429 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 MANSC1Q9H8J5 431 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 GIMAP4Q9NUV9 329 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 LUZP4Q9P127 313 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 PRRC2CQ9Y520 2896 aaKnown RBP19.45■□□□□ 0.7
SEC13-217ENST00000482647 CNTRLQ7Z7A1 2325 aa19.45■□□□□ 0.7
SEC13-217ENST00000482647 TRAV17A0A0B4J275 112 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 ATP6AP2A0A1C7CYW4 349 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 GABRR3A8MPY1 467 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 HRKO00198 91 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 PEX11AO75192 247 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 ATP6AP2O75787 350 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 SASH3O75995 380 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 IGKV3-11P04433 115 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 MAPK1P28482 360 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 CD96P40200 585 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 ERVK-8P63133 956 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 RNF4P78317 190 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 LRRC25Q8N386 305 aaPredicted RBP19.44■□□□□ 0.7
SEC13-217ENST00000482647 HORMAD2Q8N7B1 307 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 Q8NA96 180 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 DOK4Q8TEW6 326 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 EXOSC8Q96B26 276 aaKnown RBP19.44■□□□□ 0.7
SEC13-217ENST00000482647 TUBGCP3Q96CW5 907 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 CNRIP1Q96F85 164 aaPredicted RBP19.44■□□□□ 0.7
SEC13-217ENST00000482647 C3orf30Q96M34 536 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 ZNF681Q96N22 645 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 EPN3Q9H201 632 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 MIEF1Q9NQG6 463 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 SLC35C2Q9NQQ7 365 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 MYOTQ9UBF9 498 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 ERVK-19Q9WJR5 959 aa19.44■□□□□ 0.7
SEC13-217ENST00000482647 PRKNO60260 465 aaPredicted RBP19.43■□□□□ 0.7
SEC13-217ENST00000482647 SNNO75324 88 aaPredicted RBP19.43■□□□□ 0.7
SEC13-217ENST00000482647 ATP1B1P05026 303 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 TACR1P25103 407 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 OC90Q02509 493 aaPredicted RBP19.43■□□□□ 0.7
SEC13-217ENST00000482647 TUBA3CQ13748 450 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 PDCD2Q16342 344 aaPredicted RBP19.43■□□□□ 0.7
SEC13-217ENST00000482647 TUBA3EQ6PEY2 450 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 RNF111Q6ZNA4 994 aa19.43■□□□□ 0.7
SEC13-217ENST00000482647 TICAM1Q8IUC6 712 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms