RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 TNNI3P19429 210 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 ZFP36L2P47974 494 aaKnown RBP18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 XKP51811 444 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 VAC14Q08AM6 782 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 SERTAD2Q14140 314 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 RCAN2Q14206 197 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 MAPRE2Q15555 327 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 DEFB109BQ30KR1 87 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 FAM174BQ3ZCQ3 159 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 INO80CQ6PI98 192 aaPredicted RBP18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 C6orf89Q6UWU4 347 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 FUNDC1Q8IVP5 155 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 RIMKLAQ8IXN7 391 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 GLB1L3Q8NCI6 653 aaPredicted RBP18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 OR7A2PQ8NGA2 310 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 PPWD1Q96BP3 646 aaKnown RBP18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 REEP4Q9H6H4 257 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 SH3BP4Q9P0V3 963 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 ENTPD4Q9Y227 616 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 POLHQ9Y253 713 aa18.64■□□□□ 0.58
TRAPPC12-220ENST00000482645 PCSK5Q92824 1860 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 IGHV1-45A0A0A0MS14 117 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 NSG1A0A0A6YYJ2 146 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 ARGFXA6NJG6 315 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 COX6A1P12074 109 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PCSK2P16519 638 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PLIN5Q00G26 463 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 ST3GAL2Q16842 350 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PGS1Q32NB8 556 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 SPANXN4Q5MJ08 99 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PAPD4Q6PIY7 484 aaKnown RBP18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 BLOC1S3Q6QNY0 202 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 DOK4Q8TEW6 326 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 THAP4Q8WY91 577 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 NACC2Q96BF6 587 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PPCDCQ96CD2 204 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 RBM18Q96H35 190 aaKnown RBP18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 VPS50Q96JG6 964 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 IP6K3Q96PC2 410 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 ZNF160Q9HCG1 818 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 GIMAP4Q9NUV9 329 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 EHD3Q9NZN3 535 aa18.64■□□□□ 0.57
TRAPPC12-220ENST00000482645 PTPRQQ9UMZ3 2332 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 LOC102723996A0A087X1L8 192 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 LOC100653049A0A140TA62 436 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CCDC154A6NI56 674 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 PCDH17O14917 1159 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 KRT34O76011 436 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 COX4I1P13073 169 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CAPN3P20807 821 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 PTGER1P34995 402 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 RPL3P39023 403 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CPA2P48052 419 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 DGKQP52824 942 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 C21orf58P58505 322 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CHAF1BQ13112 559 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 KRT72Q14CN4 511 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 PCOLCEQ15113 449 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 PRSS53Q2L4Q9 553 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 R3HCC1LQ7Z5L2 792 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 AMER2Q8N7J2 671 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 VPS33AQ96AX1 596 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 TESCQ96BS2 214 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 SPDL1Q96EA4 605 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CNRIP1Q96F85 164 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 CRELD1Q96HD1 420 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 BBS4Q96RK4 519 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 LPAR4Q99677 370 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 ADAP2Q9NPF8 381 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 SLC35C2Q9NQQ7 365 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 TAGLN3Q9UI15 199 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 MAPRE3Q9UPY8 281 aa18.63■□□□□ 0.57
TRAPPC12-220ENST00000482645 GABRR3A8MPY1 467 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 SNRPB2P08579 225 aaKnown RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CPMP14384 443 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 PORP16435 677 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 STT3AP46977 705 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 PGDP52209 483 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 PDE7AQ13946 482 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CYLC2Q14093 348 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 DPY19L1Q2PZI1 675 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CRTC2Q53ET0 693 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 ZNF385BQ569K4 471 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CPTPQ5TA50 214 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 NDUFAF7Q7L592 441 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 ST13P4Q8IZP2 240 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CIDECQ96AQ7 238 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CMTM5Q96DZ9 223 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 PRPF18Q99633 342 aaKnown RBP18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 SLC25A23Q9BV35 468 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 ZNF700Q9H0M5 742 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 TMEM45AQ9NWC5 275 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 ATP6V1HQ9UI12 483 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 CLCA3PQ9Y6N3 262 aa18.62■□□□□ 0.57
TRAPPC12-220ENST00000482645 ERICH4A6NGS2 130 aa18.61■□□□□ 0.57
TRAPPC12-220ENST00000482645 C17orf105B2RV13 164 aa18.61■□□□□ 0.57
TRAPPC12-220ENST00000482645 ANGPT2O15123 496 aa18.61■□□□□ 0.57
TRAPPC12-220ENST00000482645 IL6P05231 212 aa18.61■□□□□ 0.57
TRAPPC12-220ENST00000482645 CSNK2A2P19784 350 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC12-220ENST00000482645 NT5EP21589 574 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms