RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 HSPB3Q12988 150 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 STX3Q13277 289 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MSLNQ13421 630 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 ITIH4Q14624 930 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SHBQ15464 509 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ALX1Q15699 326 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 RPE65Q16518 533 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CA9Q16790 459 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CTU2Q2VPK5 515 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 BEND6Q5SZJ8 279 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 MARCH8Q5T0T0 291 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 LIPNQ5VXI9 398 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SLC22A10Q63ZE4 541 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ADNP2Q6IQ32 1131 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 METTL2BQ6P1Q9 378 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 DUS1LQ6P1R4 473 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 SYCE2Q6PIF2 218 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ENPP7Q6UWV6 458 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GPRIN3Q6ZVF9 776 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NRARPQ7Z6K4 114 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 LHFPL4Q7Z7J7 247 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NOXA1Q86UR1 476 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ZC3HC1Q86WB0 502 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 TMEM173Q86WV6 379 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 RBM45Q8IUH3 476 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 CNGA4Q8IV77 575 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CCDC36Q8IYA8 594 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TMEM123Q8N131 208 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 THEM5Q8N1Q8 247 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TTC29Q8NA56 475 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 FAM83FQ8NEG4 500 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 ZNF397Q8NF99 534 aaPredicted RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SCARB1Q8WTV0 552 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 HSD17B8Q92506 261 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PIGCQ92535 297 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SEMA4DQ92854 862 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MSI2Q96DH6 328 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 COQ2Q96H96 371 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PPP1R16AQ96I34 528 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CPB2Q96IY4 423 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MS4A10Q96PG2 267 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TSSK3Q96PN8 268 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 RASL10BQ96S79 203 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ZNF347Q96SE7 839 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NAT9Q9BTE0 207 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TRMOQ9BU70 441 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 TM2D2Q9BX73 214 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 WWTR1Q9GZV5 400 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 IL22Q9GZX6 179 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PIGMQ9H3S5 423 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ASB8Q9H765 288 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SP140LQ9H930 580 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CSNK1G1Q9HCP0 422 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 MRPL17Q9NRX2 175 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 ELOVL2Q9NXB9 296 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 GRHL1Q9NZI5 618 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 FLRT1Q9NZU1 646 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 ADAM22Q9P0K1 906 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 NAGKQ9UJ70 344 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 SLC25A13Q9UJS0 675 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 CDH9Q9ULB4 789 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 RPH3ALQ9UNE2 315 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.79
VPS41-212ENST00000482217 CLIC4Q9Y696 253 aa3.84□□□□□ -1.79
VPS41-212ENST00000482217 PLB1Q6P1J6 1458 aa3.84□□□□□ -1.8
VPS41-212ENST00000482217 A0A1B0GVL5 298 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 A0A1B0GW15 77 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 A0A1W2PPQ1 181 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 LOC390937A0A1W2PQ73 354 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 A0A1W2PRB8 838 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TMEM129A0AVI4 362 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 WDR91A4D1P6 747 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 TMEM247A6NEH6 219 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 H0YJX3 145 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 P2RY10O00398 339 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CHMP2AO43633 222 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 OR1F1O43749 312 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 LCMT2O60294 686 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 BCAS1O75363 584 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 VAMP5O95183 116 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 BMP10O95393 424 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 HLA-DQA2P01906 255 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FTH1P02794 183 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 DANCRP0C864 163 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 GNSP15586 552 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ST6GAL1P15907 406 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ZNF26P17031 533 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 CNR1P21554 472 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 CCNOP22674 350 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ELAVL4P26378 380 aaKnown RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 GSTM2P28161 218 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 NMBRP28336 390 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 ALDH3A1P30838 453 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 HOXA7P31268 230 aaPredicted RBP3.83□□□□□ -1.8
VPS41-212ENST00000482217 CDKN2CP42773 168 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 RANBP1P43487 201 aa3.83□□□□□ -1.8
VPS41-212ENST00000482217 FHITP49789 147 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms