RNA–Protein interactions for RNA: ENST00000481210.5

SEC61A1-204, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 5

Gene SEC61A1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-204ENST00000481210 ATP13A3Q9H7F0 1226 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 PCDH12Q9NPG4 1184 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 ITM2CQ9NQX7 267 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 ABCB8Q9NUT2 735 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 DNAJC11Q9NVH1 559 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 TNFRSF10DQ9UBN6 386 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 PSME2Q9UL46 239 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 DOLKQ9UPQ8 538 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 EXO1Q9UQ84 846 aaKnown RBP4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 ERGIC3Q9Y282 383 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 COQ6Q9Y2Z9 468 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 KCNMB2Q9Y691 235 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 U3KQA8 63 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 U3KQV3 271 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 ZANQ9Y493 2812 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 RP1P56715 2156 aa4.78□□□□□ -1.64
SEC61A1-204ENST00000481210 TENM3Q9P273 2699 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 A0A1W2PQ67 120 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 C1orf226A1L170 272 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 OR2A25A4D2G3 310 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 PRAMEF25A6NGN4 478 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FADS2P1A8MWK0 482 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 TTC34A8MYJ7 566 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CFAP99D6REC4 459 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 M0R082 166 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 M0R129 80 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 EIF3FO00303 357 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 GNGT2O14610 69 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FPGTO14772 594 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SDC3O75056 442 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FAM20BO75063 409 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SH3BGRLO75368 114 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 E2F6O75461 281 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SERPINB7O75635 380 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 RECQL5O94762 991 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 KLHL18O94889 574 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CPSF4O95639 269 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FADS2O95864 444 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 RECKO95980 971 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 KRT6AP02538 564 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FTH1P02794 183 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 KRT6BP04259 564 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 APODP05090 189 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 LCKP06239 509 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 C8GP07360 202 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 HNRNPCP07910 306 aaKnown RBP eCLIP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 GSTM1P09488 218 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CCDC159P0C7I6 412 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 OCM2P0CE71 109 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 OCMP0CE72 109 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 LAMP1P11279 417 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 IMPDH2P12268 514 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 ZNF8P17098 575 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 TNFRSF1BP20333 461 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FPR1P21462 350 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SERPINA4P29622 427 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CD40LGP29965 261 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 PCGF2P35227 344 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 HPCAL1P37235 193 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 HALP42357 657 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 NSG1P42857 185 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 KRT6CP48668 564 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 ARRB1P49407 418 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 TPMTP51580 245 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 MVDP53602 400 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 C21orf58P58505 322 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 NCS1P62166 190 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 LSM3P62310 102 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SLC35A2P78381 396 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 RELAQ04206 551 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 EMX1Q04741 257 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 EPS8Q12929 822 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CSTF3Q12996 717 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CHIT1Q13231 466 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 SP140Q13342 867 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 IL18R1Q13478 541 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 KEAP1Q14145 624 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 VEPH1Q14D04 833 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 VMACQ2NL98 169 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 ZNF658BQ4V348 819 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 MIDNQ504T8 468 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CDKL4Q5MAI5 379 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CATSPEREQ5SY80 951 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 TPGS2Q68CL5 300 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 OR2T5Q6IEZ7 315 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 NOXRED1Q6NXP6 359 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 ZCCHC8Q6NZY4 707 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 METTL2BQ6P1Q9 378 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CRTC3Q6UUV7 619 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CBLL1Q75N03 491 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 EIF3MQ7L2H7 374 aaKnown RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 HSD11B1LQ7Z5J1 315 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 FAM124AQ86V42 546 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CIARTQ8N365 385 aaPredicted RBP4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 CPXM2Q8N436 756 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 PIK3C3Q8NEB9 887 aa4.77□□□□□ -1.65
SEC61A1-204ENST00000481210 OR4C15Q8NGM1 316 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms