RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	SH3PXD2B	A1X283	911 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	YDJC	A8MPS7	323 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173		H0YIG0	161 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	FIBP	O43427	364 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	NME6	O75414	186 aa	Predicted RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	GJB5	O95377	273 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	GSTA2	P09210	222 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	SOAT1	P35610	550 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	IER3	P46695	156 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	NUCB1	Q02818	461 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	MFGE8	Q08431	387 aa	Predicted RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	P2RY14	Q15391	338 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	MICA	Q29983	383 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	CAVIN1	Q6NZI2	390 aa	Known RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	APOBEC3F	Q8IUX4	373 aa	Known RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	AQP12A	Q8IXF9	295 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	OR8H2	Q8N162	312 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	GPR137C	Q8N3F9	429 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	AFAP1L1	Q8TED9	768 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	UBLCP1	Q8WVY7	318 aa	Predicted RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	CRYGN	Q8WXF5	182 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLCO4A1	Q96BD0	722 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	TECTB	Q96PL2	329 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	ZNF559	Q9BR84	538 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	ST6GALNAC5	Q9BVH7	336 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	MYOZ2	Q9NPC6	264 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	GDF3	Q9NR23	364 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLCO1C1	Q9NYB5	712 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	SENP1	Q9P0U3	644 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	PSORS1C1	Q9UIG5	152 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	KLHL21	Q9UJP4	597 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	TRIOBP	Q9H2D6	2365 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	TNR	Q92752	1358 aa		2.08	□□□□□ -2.08
CCNL1-223	ENST00000481173	NACA	E9PAV3	2078 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	FAM231B	A6NCW3	169 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	CHUK	O15111	745 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	GOT2	P00505	430 aa	Known RBP	2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	IDS	P22304	550 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	IL2RG	P31785	369 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	TRPC1	P48995	793 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	P2RY4	P51582	365 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	TWISTNB	Q3B726	338 aa	Predicted RBP	2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	ZNF658	Q5TYW1	1059 aa	Predicted RBP	2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	TATDN1	Q6P1N9	297 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	SHQ1	Q6PI26	577 aa	Known RBP	2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	APOOL	Q6UXV4	268 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173		Q6ZRG5	221 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	PRSS48	Q7RTY5	328 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	C17orf64	Q86WR6	236 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	KLHL7	Q8IXQ5	586 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	OR13F1	Q8NGS4	319 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	FAM104A	Q969W3	186 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	GBP5	Q96PP8	586 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	SSX3	Q99909	188 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	EBF4	Q9BQW3	602 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	LRRC2	Q9BYS8	371 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLC25A19	Q9HC21	320 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173	CHD4	Q14839	1912 aa		2.07	□□□□□ -2.08
CCNL1-223	ENST00000481173		A0A087X0K7	114 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	TRAV34	A0A0B4J273	112 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	EPO	P01588	193 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	APOA4	P06727	396 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	MDK	P21741	143 aa	Predicted RBP	2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	MAGEB1	P43366	347 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLC7A2	P52569	658 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	WNT4	P56705	351 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	OVGP1	Q12889	678 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	QRICH1	Q2TAL8	776 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	ITIH5	Q86UX2	942 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	THEM5	Q8N1Q8	247 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	TRPV3	Q8NET8	790 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	FBXO25	Q8TCJ0	367 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	C16orf74	Q96GX8	76 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	AGPAT1	Q99943	283 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173		Q9HAA7	133 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	TECR	Q9NZ01	308 aa	Known RBP	2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	RAI14	Q9P0K7	980 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	TMEM9	Q9P0T7	183 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	LRRK1	Q38SD2	2015 aa		2.06	□□□□□ -2.08
CCNL1-223	ENST00000481173	RAI1	Q7Z5J4	1906 aa	Predicted RBP	2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLC33A1	O00400	549 aa	Predicted RBP	2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	ZNF861P	O60384	105 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	ATP9A	O75110	1047 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	RAD51D	O75771	328 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	SIX3	O95343	332 aa	Predicted RBP	2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	IGHV3-9	P01782	118 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	GP5	P40197	560 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	RPS8	P62241	208 aa	Known RBP	2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	GNB2	P62879	340 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	GABPA	Q06546	454 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	CD47	Q08722	323 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	OR1C1	Q15619	314 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	ACKR1	Q16570	336 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	SEL1L2	Q5TEA6	688 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	SLC22A10	Q63ZE4	541 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	PCGF5	Q86SE9	256 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	TGIF2LY	Q8IUE0	185 aa		2.05	□□□□□ -2.08
CCNL1-223	ENST00000481173	UNC5CL	Q8IV45	518 aa		2.05	□□□□□ -2.08

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms