RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 NUDT4Q9NZJ9 180 aa12.21□□□□□ -0.45
PTPN7-212ENST00000480836 NF1P21359 2839 aa12.21□□□□□ -0.46
PTPN7-212ENST00000480836 ARHGAP21Q5T5U3 1957 aa12.21□□□□□ -0.46
PTPN7-212ENST00000480836 FIGNL2A6NMB9 653 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 FOXO6A8MYZ6 492 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 WDR1O75083 606 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 ACSL3O95573 720 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 AIFM1O95831 613 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 C2P06681 752 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 LTA4HP09960 611 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 S1PR1P21453 382 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 SPRP35270 261 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 AGFG1P52594 562 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 PLTPP55058 493 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 FBXW4P57775 412 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 KCNJ2P63252 427 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 DUSP8Q13202 625 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 RCN2Q14257 317 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 PFKFB4Q16877 469 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 DCST1Q5T197 706 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 WLSQ5T9L3 541 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 CES4AQ5XG92 561 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 WDR53Q7Z5U6 358 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 MMP21Q8N119 569 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 FBXW8Q8N3Y1 598 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 FAM13CQ8NE31 585 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 NEIL3Q8TAT5 605 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 WDR20Q8TBZ3 569 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 FBXO25Q8TCJ0 367 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 RGMAQ96B86 450 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 JSRP1Q96MG2 331 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 GNRHR2Q96P88 292 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 CDK15Q96Q40 435 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 GAL3ST4Q96RP7 486 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 TIMP4Q99727 224 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 GPATCH1Q9BRR8 931 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 CXXC4Q9H2H0 198 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 GSX1Q9H4S2 264 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 DDX31Q9H8H2 851 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 ACKR4Q9NPB9 350 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 TEX10Q9NXF1 929 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 DNAJB12Q9NXW2 375 aaKnown RBP12.2□□□□□ -0.46
PTPN7-212ENST00000480836 CRIM1Q9NZV1 1036 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 OPTCQ9UBM4 332 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 DTX4Q9Y2E6 619 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 SLC6A5Q9Y345 797 aa12.2□□□□□ -0.46
PTPN7-212ENST00000480836 MED12Q93074 2177 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 SYT5O00445 386 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 PPP6CO00743 305 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 OR7A17O14581 309 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 HCN1O60741 890 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 EPB42P16452 691 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 PIK3CBP42338 1070 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 PAFAH1B1P43034 410 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 MAGEA4P43358 317 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 DUSP2Q05923 314 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 CRYZQ08257 329 aaKnown RBP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 SLMAPQ14BN4 828 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 SETDB1Q15047 1291 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 NTRK2Q16620 822 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 SPRED3Q2MJR0 410 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 RIPPLY2Q5TAB7 128 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 PLXDC2Q6UX71 529 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 RAPH1Q70E73 1250 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 RPS27LQ71UM5 84 aaKnown RBP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 PRR22Q8IZ63 422 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 ST13P4Q8IZP2 240 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-212ENST00000480836 ZNF615Q8N8J6 731 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 CDKL2Q92772 493 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 RIT1Q92963 219 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 ADIPOR1Q96A54 375 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 EPB41L4BQ9H329 900 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 UBQLN3Q9H347 655 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 EXO5Q9H790 373 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 NMRAL1Q9HBL8 299 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 TSC22D4Q9Y3Q8 395 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 ITPR3Q14573 2671 aa12.19□□□□□ -0.46
PTPN7-212ENST00000480836 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 FAM187AA6NFU0 413 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 H0YIV9 168 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-212ENST00000480836 ZWINTO95229 277 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 S100BP04271 92 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-212ENST00000480836 FAM58BPP0C7Q3 252 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 HPDP32754 393 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-212ENST00000480836 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 ZNF136P52737 540 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 MGAT2Q10469 447 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 EIPR1Q53HC9 387 aa12.18□□□□□ -0.46
PTPN7-212ENST00000480836 MROH9Q5TGP6 573 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms