RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CLEC4DQ8WXI8 215 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CLDND1Q9NY35 253 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 DOCK3Q8IZD9 2030 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ARSFP54793 590 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 UFM1P61960 85 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ELAVL3Q14576 367 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MANEALQ5VSG8 457 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MLIPQ5VWP3 458 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 FAM156AQ8NDB6 213 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 NWD2Q9ULI1 1742 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 KHNYNO15037 678 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PORP16435 677 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RORAP35398 523 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PLCXD2Q0VAA5 305 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ZC3H14Q6PJT7 736 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SLC35B2Q8TB61 432 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 LMX1AQ8TE12 382 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 EBF4Q9BQW3 602 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 FOLH1BQ9HBA9 442 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CLDN7O95471 211 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CSTAP01040 98 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RAB28P51157 221 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 NADK2Q4G0N4 442 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 COQ5Q5HYK3 327 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 NKAPLQ5M9Q1 402 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 BEST3Q8N1M1 668 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 LRRC25Q8N386 305 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 FAM46BQ96A09 425 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RNF38Q9H0F5 515 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PREBQ9HCU5 417 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 A0A0G2JN53 185 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CCNOP22674 350 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MAN2A2P49641 1150 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MR1Q95460 341 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SLC6A7Q99884 636 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PRTFDC1Q9NRG1 225 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ANKRD28O15084 1053 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 VILLO15195 856 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 BRINP1O60477 761 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 TBX10O75333 385 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 GDF10P55107 478 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CSNK1A1LQ8N752 337 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 HORMAD2Q8N7B1 307 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 MRI1Q9BV20 369 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PIGVQ9NUD9 493 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 C2orf42Q9NWW7 574 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 POU2F3Q9UKI9 436 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RNF215Q9Y6U7 377 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 HSPE1-MOB4S4R3N1 261 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CHD3Q12873 2000 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 F5H0A9 414 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ARVCFO00192 962 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CD9P21926 228 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 RPS3P23396 243 aaKnown RBP eCLIP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PRKXP51817 358 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 DGKQP52824 942 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF267Q14586 743 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PIM3Q86V86 326 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 BARD1Q99728 777 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 OARD1Q9Y530 152 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 HCRTR2O43614 444 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 DLDP09622 509 aaKnown RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 HK3P52790 923 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 TAS2R31P59538 309 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
VEGFA-212ENST00000480614 DPY19L3Q6ZPD9 716 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 OR13C4Q8NGS5 318 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PHOX2BQ99453 314 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 PIK3C2AO00443 1686 aa9.16□□□□□ -0.94
VEGFA-212ENST00000480614 A8MU76 341 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 INMT-MINDY4F8WBC2 141 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 UBL4AP11441 157 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 GINS1Q14691 196 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 OR4F3Q6IEY1 312 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CEACAM19Q7Z692 300 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 BCL7BQ9BQE9 202 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PLEKHA3Q9HB20 300 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 STUB1Q9UNE7 303 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 DOCK11Q5JSL3 2073 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PPP1R11O60927 126 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CH25HO95992 272 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 G6PDP11413 515 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 MCCD1P59942 119 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 INCA1Q0VD86 236 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TDGQ13569 410 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PHC2Q8IXK0 858 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PIAS4Q8N2W9 510 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 SLC35F5Q8WV83 523 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 OR5P2Q8WZ92 322 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms