RNA–Protein interactions for RNA: ENST00000480358.6

SFXN2-203, Transcript of sideroflexin 2, humanhuman

TSL 5

Gene SFXN2, Length 2,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-203ENST00000480358 NKG7Q16617 165 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 DNAL1Q4LDG9 190 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 C8orf82Q6P1X6 216 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-203ENST00000480358 FAM199XQ6PEV8 388 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-203ENST00000480358 ZNF621Q6ZSS3 439 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 TRIML2Q8N7C3 387 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 PSMA8Q8TAA3 256 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 CGREF1Q99674 301 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 SLC39A3Q9BRY0 314 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 ALOXE3Q9BYJ1 711 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 LRMDAQ9H2I8 198 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 WDR54Q9H977 334 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 VAPAQ9P0L0 249 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 NXT1Q9UKK6 140 aaKnown RBP13.11□□□□□ -0.31
SFXN2-203ENST00000480358 VPS4AQ9UN37 437 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
SFXN2-203ENST00000480358 NUP214P35658 2090 aaPredicted RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 HOXB9P17482 250 aaPredicted RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 RBMS1P29558 406 aaKnown RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 GPC1P35052 558 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 CAPRIN1Q14444 709 aaKnown RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 CPZQ66K79 652 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 FAM198BQ6UWH4 519 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 TIPARPQ7Z3E1 657 aaKnown RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 DEFB107AQ8IZN7 70 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 ST13P4Q8IZP2 240 aaPredicted RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 GPATCH1Q9BRR8 931 aaKnown RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SLC25A37Q9NYZ2 338 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 PCDHGA7Q9Y5G6 932 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 DCHS1Q96JQ0 3298 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 IGKV3D-11A0A0A0MRZ8 115 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 TRBV5-3A0A0A0MS03 114 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SYNDIG1LA6NDD5 238 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SLC5A2P31639 672 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 PSME3P61289 254 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 MAP7Q14244 749 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 NCF4Q15080 339 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 ASRGL1Q7L266 308 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 MSRB3Q8IXL7 192 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 PLPP5Q8NEB5 264 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 OR9A2Q8NGT5 310 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 RBM18Q96H35 190 aaKnown RBP13.1□□□□□ -0.31
SFXN2-203ENST00000480358 ANKRD27Q96NW4 1050 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SPSB2Q99619 263 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 CXorf36Q9H7Y0 433 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SEMA3GQ9NS98 782 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SNX8Q9Y5X2 465 aa13.1□□□□□ -0.31
SFXN2-203ENST00000480358 SDK2Q58EX2 2172 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 C15orf38-AP3S2A0A0A6YYH1 394 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 OR10H2O60403 315 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 CNOT3O75175 753 aaKnown RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 RECKO95980 971 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 CD63P08962 238 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 STT3AP46977 705 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 CDK9P50750 372 aaKnown RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 NSDHLQ15738 373 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 GTDC1Q4AE62 458 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 SHISA6Q6ZSJ9 500 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 ARPINQ7Z6K5 226 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 ESX1Q8N693 406 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 DGAT2Q96PD7 388 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 SOX17Q9H6I2 414 aaPredicted RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 SIRT3Q9NTG7 399 aaPredicted RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.09□□□□□ -0.31
SFXN2-203ENST00000480358 NEUROG3Q9Y4Z2 214 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 PIEZO1Q92508 2521 aa13.09□□□□□ -0.31
SFXN2-203ENST00000480358 MYOCOSA0A1B0GUC4 107 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 CDRT15L2A8MXV6 281 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 IDSB3KWA1 339 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 STMND1H3BQB6 276 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 SLITRK5O94991 958 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 HEXBP07686 556 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 CYC1P08574 325 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 UQCRC2P22695 453 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 SLC6A2P23975 617 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 CD82P27701 267 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 EFNA3P52797 238 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 GAB1Q13480 694 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 RUNDC3AQ59EK9 446 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 NANOGP8Q6NSW7 305 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 NLGN4XQ8N0W4 816 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 ADCY4Q8NFM4 1077 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 NLGN4YQ8NFZ3 816 aaPredicted RBP13.08□□□□□ -0.31
SFXN2-203ENST00000480358 OR8J3Q8NGG0 315 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 TSLPQ969D9 159 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 TRIM4Q9C037 500 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 NANOGQ9H9S0 305 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 SPAG4Q9NPE6 437 aa13.08□□□□□ -0.31
SFXN2-203ENST00000480358 TCRBV16S1A1N1A0A5B0 115 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms