RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 CPN2P22792 545 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 DNAJA1P31689 397 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 OR1E2P47887 323 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PPM1FP49593 454 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CLCN2P51788 898 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PRKAG1P54619 331 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PCBP3P57721 371 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 VSX2P58304 361 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 GPR19Q15760 415 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 DEFB110Q30KQ9 67 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CRB2Q5IJ48 1285 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ABHD13Q7L211 337 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 GKN2Q86XP6 184 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CSNK1A1LQ8N752 337 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ARL10Q8N8L6 244 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SUN3Q8TAQ9 357 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SLC38A5Q8WUX1 472 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 KLHL6Q8WZ60 621 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TMEM19Q96HH6 336 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CSF3RQ99062 836 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CCDC3Q9BQI4 270 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 IER2Q9BTL4 223 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 GABARAPL1Q9H0R8 117 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PHF11Q9UIL8 331 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ORC6Q9Y5N6 252 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ZNF780BQ9Y6R6 833 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 EML5Q05BV3 1969 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 OTOGLQ3ZCN5 2332 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SLC28A2O43868 658 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 DNAJB6O75190 326 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CLPTM1O96005 669 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SMIM10L1P0DMW3 83 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 OR12D1P0DN82 309 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ST6GAL1P15907 406 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 FPR1P21462 350 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CDH3P22223 829 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 BUD31P41223 144 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 KHKP50053 298 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 APOFQ13790 326 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 RUNX2Q13950 521 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ELOAQ14241 798 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 IQCCQ4KMZ1 466 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TSSK4Q6SA08 328 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 USP51Q70EK9 711 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PRSS41Q7RTY9 318 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 APLFQ8IW19 511 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ABCA7Q8IZY2 2146 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 ARL14Q8N4G2 192 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 CAMKK1Q8N5S9 505 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TSPAN14Q8NG11 270 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 OR9A2Q8NGT5 310 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SFXN5Q8TD22 340 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TBC1D20Q96BZ9 403 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SMIM10Q96HG1 83 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 RDH12Q96NR8 316 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 YIPF4Q9BSR8 244 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SEMA6CQ9H3T2 930 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 IL21RQ9HBE5 538 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 STARD5Q9NSY2 213 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TMEM74BQ9NUR3 256 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 PADI2Q9Y2J8 665 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 TESMINQ9Y4I5 508 aa13.73□□□□□ -0.21
PKNOX1-206ENST00000480179 SPAG17Q6Q759 2223 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 MITFO75030 526 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 UBXN7O94888 489 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 ALOX12P18054 663 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 ZNF10P21506 573 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 IGFBP5P24593 272 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 RRM2P31350 389 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 PIGAP37287 484 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 MC3RP41968 323 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 YAP1P46937 504 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 ARHGDIAP52565 204 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 TPD52P55327 224 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 LIM2P55344 173 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 NXPH1P58417 271 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 IL1RL1Q01638 556 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 DMWDQ09019 674 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 LTB4RQ15722 352 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 DEFB133Q30KQ1 61 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 TMEM64Q6YI46 380 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 TSEN54Q7Z6J9 526 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 ZNF555Q8NEP9 628 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 GEMIN6Q8WXD5 167 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 AMBRA1Q9C0C7 1298 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 GRIP2Q9C0E4 1043 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 CLK4Q9HAZ1 481 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 FAM118AQ9NWS6 357 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 THUMPD1Q9NXG2 353 aaKnown RBP13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 NDUFAF4Q9P032 175 aa13.72□□□□□ -0.21
PKNOX1-206ENST00000480179 KCMF1Q9P0J7 381 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms