RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ABRAXAS2Q15018 415 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 MUM1Q2TAK8 710 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 GALNTL6Q49A17 601 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 KHDRBS2Q5VWX1 349 aaKnown RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 C3P1Q6ZMU1 363 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 RIPOR1Q6ZS17 1223 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 TTLL10Q6ZVT0 673 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 NDUFAF7Q7L592 441 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 METTL27Q8N6F8 245 aaPredicted RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 GBP7Q8N8V2 638 aaPredicted RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 WDR20Q8TBZ3 569 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 PIWIL2Q8TC59 973 aaKnown RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 ZNF473Q8WTR7 871 aaKnown RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 TUBGCP3Q96CW5 907 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
USP11-207ENST00000478596 SARGQ9BW04 601 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 MS4A8Q9BY19 250 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 C20orf27Q9GZN8 174 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 OR51B5Q9H339 312 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 BRF2Q9HAW0 419 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 NPHS2Q9NP85 383 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 KCNJ16Q9NPI9 418 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 CUTCQ9NTM9 273 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 CTSFQ9UBX1 484 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 VTI1BQ9UEU0 232 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 MKL2Q9ULH7 1088 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
USP11-207ENST00000478596 ASPDHA6ND91 283 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 NPIPA5E9PKD4 350 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 FOXE1O00358 373 aaPredicted RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 HDAC3O15379 428 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ASNA1O43681 348 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 EDF1O60869 148 aaKnown RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 MYO1DO94832 1006 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 LY6G6DO95868 133 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 COX6A1P12074 109 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 IL1RNP18510 177 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 PTX3P26022 381 aaPredicted RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 HOXC12P31275 282 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 HNRNPH1P31943 449 aaKnown RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 AVPR1BP47901 424 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 RAB8AP61006 207 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 HMGCS1Q01581 520 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ALDH6A1Q02252 535 aaKnown RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 ZNF33BQ06732 778 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ACSM2AQ08AH3 577 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 HERC3Q15034 1050 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 FAM214AQ32MH5 1076 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ATP6AP1LQ52LC2 224 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 TMEM35AQ53FP2 167 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ZNF766Q5HY98 468 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ACSM2BQ68CK6 577 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 VN1R5Q7Z5H4 357 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 SIAH3Q8IW03 269 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 GHDCQ8N2G8 530 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 KCT2Q8NC54 265 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 SRFBP1Q8NEF9 429 aaKnown RBP13.54□□□□□ -0.24
USP11-207ENST00000478596 CDC26Q8NHZ8 85 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 RGMAQ96B86 450 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 KCNC2Q96PR1 638 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 F2RL3Q96RI0 385 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 CRB3Q9BUF7 120 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 YIPF2Q9BWQ6 316 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ACPTQ9BZG2 426 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 UCK2Q9BZX2 261 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 CCDC134Q9H6E4 229 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 NPIPA1Q9UND3 350 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 DNAJC15Q9Y5T4 150 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 USH1CQ9Y6N9 552 aa13.54□□□□□ -0.24
USP11-207ENST00000478596 ZNF860A6NHJ4 632 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 FGF4P08620 206 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 PCSK6P29122 969 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 LSP1P33241 339 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 RPL38P63173 70 aaKnown RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 SF3A3Q12874 501 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP11-207ENST00000478596 AP5B1Q2VPB7 878 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 DEFB134Q4QY38 66 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 SPIN4Q56A73 249 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 YOD1Q5VVQ6 348 aaPredicted RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 GARNL3Q5VVW2 1013 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 PAGE2Q7Z2X7 111 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 NUDT13Q86X67 352 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 OR2L5Q8NG80 312 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 CREB3L4Q8TEY5 395 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 C8orf44Q96CB5 159 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 MMABQ96EY8 250 aaPredicted RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 CCT7Q99832 543 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 MRPL1Q9BYD6 325 aaKnown RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 SLC6A16Q9GZN6 736 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 ROGDIQ9GZN7 287 aa13.53□□□□□ -0.24
USP11-207ENST00000478596 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 CLEC4MQ9H2X3 399 aaPredicted RBP13.53□□□□□ -0.24
USP11-207ENST00000478596 SYNPO2LQ9H987 977 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms