RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ST7LQ8TDW4 575 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 CCDC47Q96A33 483 aaKnown RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 NXPE2Q96DL1 559 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 LRR1Q96L50 414 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 GAL3ST4Q96RP7 486 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 FUCA2Q9BTY2 467 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 RNF186Q9NXI6 227 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 HMG20BQ9P0W2 317 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 FOXA2Q9Y261 457 aaPredicted RBP3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF510Q9Y2H8 683 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 COLEC10Q9Y6Z7 277 aa3.48□□□□□ -1.85
CDC42BPA-212ENST00000478573 TANC1Q9C0D5 1861 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 MYH7BA7E2Y1 1941 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TRBV4-1A0A0J9YWV2 114 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 C2orf92A0A1B0GVN3 265 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TCP10L2B9ZVM9 353 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 HHLA1C9JL84 531 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 SURF6O75683 361 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 MT-ND2P03891 347 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 PRKAR1AP10644 381 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 P4HA1P13674 534 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 AADACP22760 399 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 BTDP43251 543 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 NT5C2P49902 561 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 YBEYP58557 167 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 MECOMQ03112 1051 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 VGLL4Q14135 290 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TAB1Q15750 504 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 PKN2Q16513 984 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 LPAL2Q16609 132 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 CDC42EP5Q6NZY7 148 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 CD164L2Q6UWJ8 174 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 C5orf24Q7Z6I8 188 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 GTSCR1Q86UQ5 136 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 ERO1BQ86YB8 467 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMEM126BQ8IUX1 230 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 SERPINA12Q8IW75 414 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZC3H3Q8IXZ2 948 aaKnown RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 PEX5LQ8IYB4 626 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 ZNF444Q8N0Y2 327 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TEX26Q8N6G2 289 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 CLEC1AQ8NC01 280 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 RNF149Q8NC42 400 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 HCAR2Q8TDS4 363 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 GGHQ92820 318 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 CASP10Q92851 521 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 AZIN2Q96A70 460 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 RFT1Q96AA3 541 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 THAP9Q9H5L6 903 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 HACD3Q9P035 362 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 IL19Q9UHD0 177 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 MOSPD1Q9UJG1 213 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 SATB2Q9UPW6 733 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TMED7Q9Y3B3 224 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 SELENOKQ9Y6D0 94 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TEX264Q9Y6I9 313 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 ROBO3Q96MS0 1386 aa3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 TNRC18O15417 2968 aaPredicted RBP3.47□□□□□ -1.85
CDC42BPA-212ENST00000478573 HTTP42858 3142 aa3.46□□□□□ -1.85
CDC42BPA-212ENST00000478573 GBF1Q92538 1859 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 A0A087WZ39 114 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 BICDL2A1A5D9 508 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC9B1P1A6NJY1 282 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 PRDM1O75626 825 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 HMBSP08397 361 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 MYOGP15173 224 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TYMPP19971 482 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 PRMT2P55345 433 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 STARD6P59095 220 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TIMM10P62072 90 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 GPR50Q13585 617 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 ITGA9Q13797 1035 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 PDE7AQ13946 482 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TMEM132DQ14C87 1099 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 MAPK11Q15759 364 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 DUSP5Q16690 384 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 FFAR4Q5NUL3 377 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 PLPP4Q5VZY2 271 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF776Q68DI1 518 aaPredicted RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TCEAL6Q6IPX3 200 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC27A4Q6P1M0 643 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 FIP1L1Q6UN15 594 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 MOB2Q70IA6 237 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TRMT11Q7Z4G4 463 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCDC185Q8N715 623 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 SIDT2Q8NBJ9 832 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 CD99L2Q8TCZ2 262 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 SEPT8Q92599 483 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 OPTNQ96CV9 577 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 IL12RB2Q99665 862 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 DDX50Q9BQ39 737 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 PYGO2Q9BRQ0 406 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCM2Q9BSQ5 444 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 LRRC2Q9BYS8 371 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 WWTR1Q9GZV5 400 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms