RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RABEP2Q9H5N1 569 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 PPIEQ9UNP9 301 aaKnown RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 MAPRE3Q9UPY8 281 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 ZNF780BQ9Y6R6 833 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 USP24Q9UPU5 2620 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 PKD1L2Q7Z442 2459 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 SAGE2PA6NJ88 616 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 HPP00738 406 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 PORP16435 677 aaPredicted RBP18.63■□□□□ 0.57
ACTB-210ENST00000477812 CLNS1AP54105 237 aaKnown RBP18.63■□□□□ 0.57
ACTB-210ENST00000477812 VAC14Q08AM6 782 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 NDUFAF7Q7L592 441 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 LRRC25Q8N386 305 aaPredicted RBP18.63■□□□□ 0.57
ACTB-210ENST00000477812 ZSCAN1Q8NBB4 408 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 OR9I1Q8NGQ6 314 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 PPWD1Q96BP3 646 aaKnown RBP18.63■□□□□ 0.57
ACTB-210ENST00000477812 AMDHD1Q96NU7 426 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 DGAT2Q96PD7 388 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 CXorf21Q9HAI6 301 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 PNO1Q9NRX1 252 aaKnown RBP18.63■□□□□ 0.57
ACTB-210ENST00000477812 TRIM33Q9UPN9 1127 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 ENTPD4Q9Y227 616 aa18.63■□□□□ 0.57
ACTB-210ENST00000477812 C9JVG2 144 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 MASP2O00187 686 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 PEX12O00623 359 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 OR10H2O60403 315 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 DDAH2O95865 285 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 GPR143P51810 404 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 WNT3P56703 355 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 PHC1P78364 1004 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 MGAT2Q10469 447 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 SQLEQ14534 574 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 RPS6KA2Q15349 733 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 SPRED3Q2MJR0 410 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 SPANXN4Q5MJ08 99 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 CPTPQ5TA50 214 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 PAOXQ6QHF9 649 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 CPSF7Q8N684 471 aaKnown RBP18.62■□□□□ 0.57
ACTB-210ENST00000477812 OR8J2Q8NGG1 315 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 CCT8L2Q96SF2 557 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 LPAR4Q99677 370 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 TUBB6Q9BUF5 446 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 BHLHE41Q9C0J9 482 aaPredicted RBP18.62■□□□□ 0.57
ACTB-210ENST00000477812 GIMAP4Q9NUV9 329 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 SH3BP4Q9P0V3 963 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 POLHQ9Y253 713 aa18.62■□□□□ 0.57
ACTB-210ENST00000477812 MGAQ8IWI9 3026 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CROCCQ5TZA2 2017 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 NSG1A0A0A6YYJ2 146 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 A8MUA0 341 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 C17orf105B2RV13 164 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 PDPK1O15530 556 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 SCN2BO60939 215 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 SLC22A3O75751 556 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 FAM107AO95990 144 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 IFNA16P05015 189 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CT62P0C5K7 136 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CD1EP15812 388 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 PTGER1P34995 402 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 SLC26A5P58743 744 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 STX1BP61266 288 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 SRSF11Q05519 484 aaKnown RBP18.61■□□□□ 0.57
ACTB-210ENST00000477812 Q0VFX4 171 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 LTB4RQ15722 352 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 DPY19L1Q2PZI1 675 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 PRICKLE4Q2TBC4 344 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 ZNF628Q5EBL2 1059 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 DCAF10Q5QP82 559 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 PLAG1Q6DJT9 500 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 FUNDC1Q8IVP5 155 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CCDC116Q8IYX3 515 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 GLB1L3Q8NCI6 653 aaPredicted RBP18.61■□□□□ 0.57
ACTB-210ENST00000477812 OR14A16Q8NHC5 309 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CTHRC1Q96CG8 243 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 RBM18Q96H35 190 aaKnown RBP18.61■□□□□ 0.57
ACTB-210ENST00000477812 PRPF18Q99633 342 aaKnown RBP18.61■□□□□ 0.57
ACTB-210ENST00000477812 GLIPR2Q9H4G4 154 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 ZNF160Q9HCG1 818 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 SAR1AQ9NR31 198 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 ACSS1Q9NUB1 689 aaPredicted RBP18.61■□□□□ 0.57
ACTB-210ENST00000477812 ATAD3AQ9NVI7 634 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 TMEM45AQ9NWC5 275 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 MAT2BQ9NZL9 334 aa18.61■□□□□ 0.57
ACTB-210ENST00000477812 CACNA1GO43497 2377 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 HRKO00198 91 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 CLPSP04118 112 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 IGKV3-11P04433 115 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 DDX5P17844 614 aaKnown RBP18.6■□□□□ 0.57
ACTB-210ENST00000477812 NCF2P19878 526 aaPredicted RBP18.6■□□□□ 0.57
ACTB-210ENST00000477812 NTSP30990 170 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 KIR3DL1P43629 444 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 RCAN2Q14206 197 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 MLC1Q15049 377 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 FAM174BQ3ZCQ3 159 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 APCDD1LQ8NCL9 501 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 MORN4Q8NDC4 146 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 OR9A2Q8NGT5 310 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 ZNF675Q8TD23 568 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 RIT1Q92963 219 aa18.6■□□□□ 0.57
ACTB-210ENST00000477812 FBXL20Q96IG2 436 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms