RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MRPS14O60783 128 aaKnown RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 CTSVO60911 334 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 UBXN7O94888 489 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 AK1P00568 194 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 MT-ND1P03886 318 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 IFNW1P05000 195 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 GUSBP08236 651 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ZNF888P0CJ79 500 aaPredicted RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 EFNA1P20827 205 aaPredicted RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 MATN1P21941 496 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 CDH3P22223 829 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 IGFBP5P24593 272 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 CERS1P27544 350 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 RYKP34925 604 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 CAPZBP47756 277 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 AFF3P51826 1226 aaKnown RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 RAB8AP61006 207 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ARF3P61204 181 aaPredicted RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 MYBPC1Q00872 1141 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TFF2Q03403 129 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 APOFQ13790 326 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FAM53BQ14153 422 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 LIN52Q52LA3 116 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TCTE1Q5JU00 501 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TMEM31Q5JXX7 168 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 COX20Q5RI15 118 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 C6orf132Q5T0Z8 1188 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ATAD3BQ5T9A4 648 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 BORAQ6PGQ7 559 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 THAP5Q7Z6K1 395 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ALDH16A1Q8IZ83 802 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 LRRC25Q8N386 305 aaPredicted RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 ARL14Q8N4G2 192 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 HORMAD2Q8N7B1 307 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 C19orf47Q8N9M1 422 aaKnown RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 PIK3C3Q8NEB9 887 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TSPAN14Q8NG11 270 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SUN3Q8TAQ9 357 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FAM110BQ8TC76 370 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SPPL2AQ8TCT8 520 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 LMX1AQ8TE12 382 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ADAMTS16Q8TE57 1224 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SLC38A5Q8WUX1 472 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 RLN3Q8WXF3 142 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TAMM41Q96BW9 452 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ZDHHC12Q96GR4 267 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TPD52L3Q96J77 140 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ZNF681Q96N22 645 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 ZNF300Q96RE9 604 aaPredicted RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 NRTNQ99748 197 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 PIP5K1AQ99755 562 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 APOL4Q9BPW4 351 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 TPSD1Q9BZJ3 242 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FOXQ1Q9C009 403 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 VCX3AQ9NNX9 186 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 EXD2Q9NVH0 621 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FAM118AQ9NWS6 357 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 GIN1Q9NXP7 522 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 KCMF1Q9P0J7 381 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FBXW2Q9UKT8 454 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 MRPS33Q9Y291 106 aaKnown RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 ENPP4Q9Y6X5 453 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TLCD2A6NGC4 264 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TRIM64CA6NLI5 447 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 B4DGG1 531 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 SYT5O00445 386 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 HMGN4O00479 90 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 BCAT2O15382 392 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 YKT6O15498 198 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 HS6ST1O60243 411 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 GALR3O60755 368 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 GCM2O75603 506 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 ERAL1O75616 437 aaKnown RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 MFN2O95140 757 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 SNAP29O95721 258 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 OXSR1O95747 527 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 ATP1B1P05026 303 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PROS1P07225 676 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 NR2F1P10589 423 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 GNSP15586 552 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PORP16435 677 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 IFNA8P32881 189 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 GPR3P46089 330 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 XCR1P46094 333 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PXNP49023 591 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 CDK9P50750 372 aaKnown RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 TPD52P55327 224 aaPredicted RBP7.48□□□□□ -1.21
VMA21-203ENST00000477649 LIM2P55344 173 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 RAB38P57729 211 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 GABARAPL2P60520 117 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 CXCR4P61073 352 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 ESRRGP62508 458 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 VLDLRP98155 873 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 TEKQ02763 1124 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 C16orf72Q14CZ0 275 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 PRSS53Q2L4Q9 553 aa7.48□□□□□ -1.21
VMA21-203ENST00000477649 IQCCQ4KMZ1 466 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms