RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SSTR2P30874 369 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 PBX3P40426 434 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 HSPA7P48741 367 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 KIAA1024LP59773 190 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 OPCMLQ14982 345 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC8B1Q6J4K2 584 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 ANKRD46Q86W74 232 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 TTC9BQ8N6N2 239 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 POP5Q969H6 163 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 SUV39H2Q9H5I1 410 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 EML4Q9HC35 981 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 DUSP22Q9NRW4 184 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 METTL1Q9UBP6 276 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 MBD1Q9UIS9 605 aaPredicted RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC39A10Q9ULF5 831 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 NEU3Q9UQ49 428 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 AAR2Q9Y312 384 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 OAS3Q9Y6K5 1087 aaKnown RBP12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 SHROOM3Q8TF72 1996 aa12.07□□□□□ -0.48
RTFDC1-207ENST00000477573 PRAMEF33A0A0G2JMD5 474 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 GNGT2O14610 69 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 GPR171O14626 319 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PRAMEF10O60809 474 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MGAT1P26572 445 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 NOS3P29474 1203 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RBP2P50120 134 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MC2RQ01718 297 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RING1Q06587 406 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SMCO1Q147U7 214 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 GUCA2BQ16661 112 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PYDC2Q56P42 97 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 C16orf54Q6UWD8 224 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF367Q7RTV3 350 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 IFNEQ86WN2 208 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM173Q86WV6 379 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 TMEM151AQ8N4L1 468 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 L3MBTL4Q8NA19 623 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 OR4F6Q8NGB9 312 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 OR11H7Q8NGC8 314 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ZBED6CLQ96FA7 236 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MSLNLQ96KJ4 702 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SLCO1C1Q9NYB5 712 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 WWOXQ9NZC7 414 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 TP53TG5Q9Y2B4 290 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MARCH11A6NNE9 402 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SGK494L7N484 410 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PER2O15055 1255 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MATN3O15232 486 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ANXA9O76027 345 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PRAMEF1O95521 474 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 NCF1P14598 390 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RHOQP17081 205 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 NFKB1P19838 968 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 IGFBP5P24593 272 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 CD86P42081 329 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MAGEA2P43356 314 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PIK3CGP48736 1102 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 DNAJB13P59910 316 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SNRPEP62304 92 aaKnown RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 UGT3A2Q3SY77 523 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SOWAHCQ53LP3 525 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SPANXN3Q5MJ09 141 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RPL13AP3Q6NVV1 102 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 METAP1DQ6UB28 335 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PRSS55Q6UWB4 352 aaPredicted RBP12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.06□□□□□ -0.482e-19■■■■■ 46.5
RTFDC1-207ENST00000477573 LARP4Q71RC2 724 aaKnown RBP eCLIP12.06□□□□□ -0.481e-8■■□□□ 11.5
RTFDC1-207ENST00000477573 TAS1R1Q7RTX1 841 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 NAXDQ8IW45 347 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ARHGAP12Q8IWW6 846 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 DCBLD1Q8N8Z6 715 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 OR6X1Q8NH79 312 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SCMH1Q96GD3 660 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 IGSF21Q96ID5 467 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 KCNJ15Q99712 375 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 MAP3K3Q99759 626 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 RHNO1Q9BSD3 238 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 YIPF4Q9BSR8 244 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SOX7Q9BT81 388 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 EDEM2Q9BV94 578 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 SPASTQ9UBP0 616 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 GPR160Q9UJ42 338 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 BTRCQ9Y297 605 aa12.06□□□□□ -0.48
RTFDC1-207ENST00000477573 ABHD14A-ACY1A0A1B0GW23 586 aa12.05□□□□□ -0.48
RTFDC1-207ENST00000477573 SLC38A8A6NNN8 435 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms