RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 COPG1Q9Y678 874 aaKnown RBP14.35□□□□□ -0.11
SEC13-215ENST00000477547 ZNF780BQ9Y6R6 833 aa14.35□□□□□ -0.11
SEC13-215ENST00000477547 LOC102723996A0A087X1L8 192 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 IGHV3-20A0A0C4DH32 117 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 C9JVG2 144 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 ERVH48-1M5A8F1 160 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 PEX12O00623 359 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 PDPK1O15530 556 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SNX3O60493 162 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 TBX19O60806 448 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 COX6A1P12074 109 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 PCSK2P16519 638 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 FEN1P39748 380 aaKnown RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 STT3AP46977 705 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 UCNP55089 124 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 TMPRSS3P57727 454 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 UFM1P61960 85 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 LY6DQ14210 128 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SQLEQ14534 574 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 CPEB2Q7Z5Q1 589 aaKnown RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 RIMKLAQ8IXN7 391 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SAMD14Q8IZD0 417 aaPredicted RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 LRRC25Q8N386 305 aaPredicted RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 OR7A2PQ8NGA2 310 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 OR11G2Q8NGC1 345 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 VPS50Q96JG6 964 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 PNO1Q9NRX1 252 aaKnown RBP14.34□□□□□ -0.11
SEC13-215ENST00000477547 ATAD3AQ9NVI7 634 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 P4HTMQ9NXG6 502 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 ZIM2Q9NZV7 527 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SH3BP4Q9P0V3 963 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 FBXL4Q9UKA2 621 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
SEC13-215ENST00000477547 MED13Q9UHV7 2174 aa14.33□□□□□ -0.11
SEC13-215ENST00000477547 NUP214P35658 2090 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 CPAMD8Q8IZJ3 1885 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 IGHV1-45A0A0A0MS14 117 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 SAGE2PA6NJ88 616 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 A8MUA0 341 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 NKX2-8O15522 239 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 CSNK2A2P19784 350 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 ATP4BP51164 291 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 XKP51811 444 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 IRX1P78414 480 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 DUSP2Q05923 314 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 PCOLCEQ15113 449 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 ELAVL1Q15717 326 aaKnown RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 PRSS53Q2L4Q9 553 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 DPY19L1Q2PZI1 675 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 CRTC2Q53ET0 693 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 C6orf163Q5TEZ5 329 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 PAPD4Q6PIY7 484 aaKnown RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 KIRREL2Q6UWL6 708 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 ST13P4Q8IZP2 240 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 C7orf57Q8NEG2 295 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 OR9I1Q8NGQ6 314 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 CIDECQ96AQ7 238 aaPredicted RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 NACC2Q96BF6 587 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 TESCQ96BS2 214 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 TEX37Q96LM6 180 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 IP6K3Q96PC2 410 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 BBS4Q96RK4 519 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 PRPF18Q99633 342 aaKnown RBP14.33□□□□□ -0.12
SEC13-215ENST00000477547 LPAR4Q99677 370 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 CPNE5Q9HCH3 593 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 POLHQ9Y253 713 aa14.33□□□□□ -0.12
SEC13-215ENST00000477547 NSG1A0A0A6YYJ2 146 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 A0A1W2PQ72 361 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 GABRR3A8MPY1 467 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 SLC22A3O75751 556 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 FAM107AO95990 144 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 SLC35E2P0CK97 266 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 PORP16435 677 aaPredicted RBP14.32□□□□□ -0.12
SEC13-215ENST00000477547 NT5EP21589 574 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 PTGER1P34995 402 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 MRPL19P49406 292 aaKnown RBP14.32□□□□□ -0.12
SEC13-215ENST00000477547 LTB4RQ15722 352 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 PGS1Q32NB8 556 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 FAM174BQ3ZCQ3 159 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 SPANXN4Q5MJ08 99 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 CPTPQ5TA50 214 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 METTL21CQ5VZV1 264 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 CPZQ66K79 652 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 PAOXQ6QHF9 649 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 CAMKMTQ7Z624 323 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 GLB1L3Q8NCI6 653 aaPredicted RBP14.32□□□□□ -0.12
SEC13-215ENST00000477547 OR14A16Q8NHC5 309 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 ZFP28Q8NHY6 868 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 NUDT8Q8WV74 236 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 ZNF681Q96N22 645 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 CCT8L2Q96SF2 557 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 ZNF700Q9H0M5 742 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 SLAMF7Q9NQ25 335 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 TAS2R7Q9NYW3 318 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 MAN2B2Q9Y2E5 1009 aa14.32□□□□□ -0.12
SEC13-215ENST00000477547 SPTA1P02549 2419 aa14.31□□□□□ -0.12
SEC13-215ENST00000477547 C17orf105B2RV13 164 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms