RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PPIAP62937 165 aaKnown RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 BTG2P78543 158 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CCZ1BP86790 482 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CCZ1P86791 482 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 MGAT5Q09328 741 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 MYBPHQ13203 477 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 FRG1Q14331 258 aaKnown RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CDKL4Q5MAI5 379 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CATSPEREQ5SY80 951 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 WLSQ5T9L3 541 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 TTC27Q6P3X3 843 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 RTL4Q6ZR62 310 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 FKBP9P1Q75LS8 142 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 TMEM200AQ86VY9 491 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 LRRC8AQ8IWT6 810 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CA13Q8N1Q1 262 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 KIF2BQ8N4N8 673 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 BBOF1Q8ND07 529 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 PSD4Q8NDX1 1056 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 OR10Q1Q8NGQ4 319 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 OR8K3Q8NH51 312 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 TSNARE1Q96NA8 513 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 FAM173AQ9BQD7 235 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CD244Q9BZW8 370 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 EHD1Q9H4M9 534 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 LDAHQ9H6V9 325 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 EXO5Q9H790 373 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 IFT22Q9H7X7 185 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 SACM1LQ9NTJ5 587 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 B4GALT7Q9UBV7 327 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 PPIEQ9UNP9 301 aaKnown RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 SLC22A14Q9Y267 594 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 ABCA12Q86UK0 2595 aa6.74□□□□□ -1.33
BRCA1-214ENST00000477152 PHF3Q92576 2039 aaKnown RBP6.74□□□□□ -1.33
BRCA1-214ENST00000477152 CRYBG3Q68DQ2 2970 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 IGKV3D-11A0A0A0MRZ8 115 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 CAPN14A8MX76 684 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ERI3O43414 337 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 CTNSO60931 367 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 WDR1O75083 606 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SMIM10L1P0DMW3 83 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 TCP1P17987 556 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PTGER1P34995 402 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ZFP36L2P47974 494 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 EFNA3P52797 238 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PHEXP78562 749 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 FOLH1Q04609 750 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 RBM20Q5T481 1227 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 TEDDM1Q5T9Z0 273 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 KLHDC8AQ8IYD2 350 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 Q8N1Y9 231 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 FAM109AQ8N4B1 249 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 NFAM1Q8NET5 270 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 OR2L5Q8NG80 312 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SLC22A8Q8TCC7 542 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 NCLNQ969V3 563 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 CFAP36Q96G28 342 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SMIM10Q96HG1 83 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PELOQ9BRX2 385 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 EFCAB11Q9BUY7 163 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 REXO4Q9GZR2 422 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 MS4A5Q9H3V2 200 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 IL1RL2Q9HB29 575 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 NECTIN3Q9NQS3 549 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 MS4A12Q9NXJ0 267 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 WWOXQ9NZC7 414 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 KCMF1Q9P0J7 381 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ADGRE2Q9UHX3 823 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SH2B3Q9UQQ2 575 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 NEU2Q9Y3R4 380 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 X6R8D5 127 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PKDREJQ9NTG1 2253 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ZNF37AP17032 561 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ACVR2AP27037 513 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 TLX1P31314 330 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 KCNC1P48547 511 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 MAN2A2P49641 1150 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 ATP6V0D1P61421 351 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 RPP38P78345 283 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 HSF1Q00613 529 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PMPCAQ10713 525 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SLC10A1Q14973 349 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SLC25A35Q3KQZ1 300 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 IL20RBQ6UXL0 311 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 B3GNT6Q6ZMB0 384 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 FAM47EQ6ZV65 393 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SLC15A4Q8N697 577 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 APCDD1LQ8NCL9 501 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SLCO2A1Q92959 643 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 DTNBP1Q96EV8 351 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 PTCD3Q96EY7 689 aaKnown RBP6.73□□□□□ -1.33
BRCA1-214ENST00000477152 KCNC2Q96PR1 638 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 OR4K3Q96R72 315 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 SMC6Q96SB8 1091 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 OSBPL9Q96SU4 736 aa6.73□□□□□ -1.33
BRCA1-214ENST00000477152 TREX2Q9BQ50 279 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms