RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SPATA9Q9BWV2 254 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 TMEM38AQ9H6F2 299 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 ANAPC2Q9UJX6 822 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.23
COL4A6-206ENST00000477085 PRAMEF27A3QJZ7 478 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 TGFBR3LH3BV60 316 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 TOX3O15405 576 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF749O43361 778 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 TPST1O60507 370 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 GPR75O95800 540 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 UMPSP11172 480 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 SPTBP11277 2137 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 CPMP14384 443 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 PSMA4P25789 261 aaKnown RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 PCGF2P35227 344 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 MC3RP41968 323 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 EMP3P54852 163 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 GRM7Q14831 915 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 GCNT6Q5T4J0 391 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 TNFAIP8L2Q6P589 184 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 CEACAM20Q6UY09 585 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 LRRC25Q8N386 305 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ZFP28Q8NHY6 868 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ATOH1Q92858 354 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 RAB8BQ92930 207 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 C16orf58Q96GQ5 468 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 PEX11GQ96HA9 241 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 SEMA6AQ9H2E6 1030 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 CUTCQ9NTM9 273 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 ZCCHC3Q9NUD5 404 aaKnown RBP13.58□□□□□ -0.24
COL4A6-206ENST00000477085 CLDN16Q9Y5I7 305 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 MAU2Q9Y6X3 613 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 UNC13CQ8NB66 2214 aa13.58□□□□□ -0.24
COL4A6-206ENST00000477085 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 FAM149AA5PLN7 773 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 UPK1AO00322 258 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 HMGN4O00479 90 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 CDX4O14627 284 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 GMNNO75496 209 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 AQP1P29972 269 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 VHLP40337 213 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 PRKAG1P54619 331 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 MRPS35P82673 323 aaKnown RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 TP53BP2Q13625 1128 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 SF3A2Q15428 464 aaKnown RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 MTX3Q5HYI7 312 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 OGFRL1Q5TC84 451 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 DGAT2L6Q6ZPD8 337 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 TTLL10Q6ZVT0 673 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 C11orf65Q8NCR3 313 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 OR7G2Q8NG99 324 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 NFKBIDQ8NI38 313 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 TANKQ92844 425 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 COL26A1Q96A83 441 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 RNF31Q96EP0 1072 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 GIMAP5Q96F15 307 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 OTUB1Q96FW1 271 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 CHID1Q9BWS9 393 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 RSPO3Q9BXY4 272 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 FGF21Q9NSA1 209 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 GIMAP4Q9NUV9 329 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 OLAHQ9NV23 265 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 DHCR7Q9UBM7 475 aaKnown RBP13.57□□□□□ -0.24
COL4A6-206ENST00000477085 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 ADAMTS20P59510 1910 aa13.57□□□□□ -0.24
COL4A6-206ENST00000477085 JRKO75564 520 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 ANKRD34CP0C6C1 535 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF883P0CG24 379 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 ARAFP10398 606 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 PORP16435 677 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-206ENST00000477085 IL10P22301 178 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 OR1D4P47884 311 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 DSTNP60981 165 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 BTG2P78543 158 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 DAB2P98082 770 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 MGAT2Q10469 447 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 TRIP10Q15642 601 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 ZNF628Q5EBL2 1059 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 ZC3H7AQ8IWR0 971 aaKnown RBP13.56□□□□□ -0.24
COL4A6-206ENST00000477085 OR5D16Q8NGK9 328 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 PPWD1Q96BP3 646 aaKnown RBP13.56□□□□□ -0.24
COL4A6-206ENST00000477085 CCDC74BQ96LY2 380 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 YIPF4Q9BSR8 244 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 AGPAT4Q9NRZ5 378 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 SEMA3GQ9NS98 782 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 SPACA6W5XKT8 324 aa13.56□□□□□ -0.24
COL4A6-206ENST00000477085 H0YIG0 161 aa13.55□□□□□ -0.24
COL4A6-206ENST00000477085 NTN3O00634 580 aaPredicted RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 CDC123O75794 336 aaPredicted RBP13.55□□□□□ -0.24
COL4A6-206ENST00000477085 ATP1B1P05026 303 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms