RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 YOD1Q5VVQ6 348 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-211ENST00000476772 TMEM107Q6UX40 140 aa27.11■■□□□ 1.93
VEGFA-211ENST00000476772 AQP12AQ8IXF9 295 aa27.11■■□□□ 1.93
VEGFA-211ENST00000476772 OR51Q1Q8NH59 317 aa27.11■■□□□ 1.93
VEGFA-211ENST00000476772 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-211ENST00000476772 COL26A1Q96A83 441 aa27.11■■□□□ 1.93
VEGFA-211ENST00000476772 ANKRD9Q96BM1 317 aaPredicted RBP27.11■■□□□ 1.93
VEGFA-211ENST00000476772 RAD21L1Q9H4I0 556 aa27.11■■□□□ 1.93
VEGFA-211ENST00000476772 CXCR6O00574 342 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 DSCR3O14972 297 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 CBFA2T3O75081 653 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 PORP16435 677 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-211ENST00000476772 ZFP36L1Q07352 338 aaKnown RBP27.1■■□□□ 1.93
VEGFA-211ENST00000476772 FADDQ13158 208 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 ERV3-1Q14264 604 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 C16orf72Q14CZ0 275 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 TMEM64Q6YI46 380 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 SZRD1Q7Z422 152 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 C6orf120Q7Z4R8 191 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 MAGED4Q96JG8 741 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 SPATA9Q9BWV2 254 aa27.1■■□□□ 1.93
VEGFA-211ENST00000476772 C4orf47A7E2U8 309 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 H3BNX3 289 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 GMNNO75496 209 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 PDX1P52945 283 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 POLE2P56282 527 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 TRA2AQ13595 282 aaKnown RBP eCLIP27.09■■□□□ 1.931e-8■■□□□ 12.8
VEGFA-211ENST00000476772 TP53BP2Q13625 1128 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 VMACQ2NL98 169 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 ADCY4Q8NFM4 1077 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 RNF31Q96EP0 1072 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 NSMCE2Q96MF7 247 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 RASSF4Q9H2L5 321 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 ZCCHC3Q9NUD5 404 aaKnown RBP27.09■■□□□ 1.93
VEGFA-211ENST00000476772 OCIAD1Q9NX40 245 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 RARRES3Q9UL19 164 aa27.09■■□□□ 1.93
VEGFA-211ENST00000476772 MRPS33Q9Y291 106 aaKnown RBP27.09■■□□□ 1.93
VEGFA-211ENST00000476772 TCRBV5S2A0A599 114 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 TNFRSF21O75509 655 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 CDC123O75794 336 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-211ENST00000476772 MC3RP41968 323 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 XCR1P46094 333 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 RPS26P62854 115 aaKnown RBP27.08■■□□□ 1.93
VEGFA-211ENST00000476772 ERICH5Q6P6B1 374 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 SFXN5Q8TD22 340 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 KAT2AQ92830 837 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 NCLNQ969V3 563 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 TBC1D20Q96BZ9 403 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 GORASP2Q9H8Y8 452 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 STX18Q9P2W9 335 aaKnown RBP27.08■■□□□ 1.93
VEGFA-211ENST00000476772 CDC14AQ9UNH5 594 aa27.08■■□□□ 1.93
VEGFA-211ENST00000476772 COL27A1Q8IZC6 1860 aaPredicted RBP27.08■■□□□ 1.93
VEGFA-211ENST00000476772 A0A1B0GX78 115 aa27.08■■□□□ 1.92
VEGFA-211ENST00000476772 C1orf189Q5VU69 101 aa27.08■■□□□ 1.92
VEGFA-211ENST00000476772 ZNF595Q8IYB9 648 aa27.08■■□□□ 1.92
VEGFA-211ENST00000476772 MAL2Q969L2 176 aa27.08■■□□□ 1.92
VEGFA-211ENST00000476772 ELP4Q96EB1 424 aa27.08■■□□□ 1.92
VEGFA-211ENST00000476772 BLACEA4D250 179 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 ANPEPP15144 967 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 CSTF2P33240 577 aaKnown RBP eCLIP27.07■■□□□ 1.92
VEGFA-211ENST00000476772 SLC13A2Q13183 592 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 GCNT6Q5T4J0 391 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 ZFP1Q6P2D0 407 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 PRTFDC1Q9NRG1 225 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 FAF1Q9UNN5 650 aaPredicted RBP27.07■■□□□ 1.92
VEGFA-211ENST00000476772 SRPK3Q9UPE1 567 aa27.07■■□□□ 1.92
VEGFA-211ENST00000476772 LRP3O75074 770 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 CREG1O75629 220 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 TIAF1O95411 115 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 FHP07954 510 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 PPP2R1BP30154 601 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 PRKAG1P54619 331 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 HORMAD2Q8N7B1 307 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 FAM162AQ96A26 154 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 SLC35G5Q96KT7 338 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 YIPF2Q9BWQ6 316 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 ANKRA2Q9H9E1 313 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 ZNF304Q9HCX3 659 aa27.06■■□□□ 1.92
VEGFA-211ENST00000476772 EFCAB7A8K855 629 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 TGFBR3LH3BV60 316 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 EMC8O43402 210 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 JRKO75564 520 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 BAG2O95816 211 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 ATP1B1P05026 303 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 FBLP22087 321 aaKnown RBP27.05■■□□□ 1.92
VEGFA-211ENST00000476772 MRPS35P82673 323 aaKnown RBP27.05■■□□□ 1.92
VEGFA-211ENST00000476772 DSG2Q14126 1118 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 CCDC157Q569K6 752 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 RHBDD2Q6NTF9 364 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 TNFAIP8L2Q6P589 184 aaPredicted RBP27.05■■□□□ 1.92
VEGFA-211ENST00000476772 TMEM126BQ8IUX1 230 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 OR56A1Q8NGH5 318 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 NETO1Q8TDF5 533 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 CANT1Q8WVQ1 401 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 SLCO4A1Q96BD0 722 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 MOAP1Q96BY2 351 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 DUS3LQ96G46 650 aaKnown RBP27.05■■□□□ 1.92
VEGFA-211ENST00000476772 SLC7A5P2Q9GIP4 190 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 SERHL2Q9H4I8 314 aa27.05■■□□□ 1.92
VEGFA-211ENST00000476772 C3orf14Q9HBI5 128 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms