RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 WDSUB1Q8N9V3 476 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 COLGALT1Q8NBJ5 622 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ZNRF1Q8ND25 227 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 OR4F5Q8NH21 305 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 GTF3AQ92664 365 aaKnown RBP4.92□□□□□ -1.62
VPS50-212ENST00000476413 NABP1Q96AH0 204 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 DEFB118Q96PH6 123 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 LGMNQ99538 433 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 WDR41Q9HAD4 459 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 STARD5Q9NSY2 213 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 MIOXQ9UGB7 285 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ISY1Q9ULR0 285 aaKnown RBP4.92□□□□□ -1.62
VPS50-212ENST00000476413 NIP7Q9Y221 180 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS50-212ENST00000476413 ENTPD4Q9Y227 616 aa4.92□□□□□ -1.62
VPS50-212ENST00000476413 ARHGEF33A8MVX0 844 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 MEI4A8MW99 385 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 EPM2AB3EWF7 344 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 FBP2O00757 339 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 TFECO14948 347 aaPredicted RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 CYP11B1P15538 503 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 CD1DP15813 335 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 UGT1A4P22310 534 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 NDST1P52848 882 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 SLC26A5P58743 744 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 GMFBP60983 142 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 GABPB1Q06547 395 aaPredicted RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 ZNF146Q15072 292 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 TTC31Q49AM3 519 aaPredicted RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 FASTKD1Q53R41 847 aaKnown RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 ADAM5Q6NVV9 412 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 IRGCQ6NXR0 463 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 ZNF613Q6PF04 617 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 OLFM4Q6UX06 510 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 UNC5DQ6UXZ4 953 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 MCM10Q7L590 875 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 GPR142Q7Z601 462 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 Q8NBF4 154 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 FAM71CQ8NEG0 241 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 ANKRD20A12PQ8NF67 263 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 RDH11Q8TC12 318 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 SPPL2AQ8TCT8 520 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 PHYHIPQ92561 330 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 TAF4BQ92750 862 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 RCHY1Q96PM5 261 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 TNFRSF13CQ96RJ3 184 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 SYT11Q9BT88 431 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 CCSER1Q9C0I3 900 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 RAB17Q9H0T7 212 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 UPF3AQ9H1J1 476 aaKnown RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 LIN28AQ9H9Z2 209 aaKnown RBP4.91□□□□□ -1.62
VPS50-212ENST00000476413 ZDHHC18Q9NUE0 388 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 SLC6A5Q9Y345 797 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 KIF26BQ2KJY2 2108 aa4.91□□□□□ -1.62
VPS50-212ENST00000476413 ARHGEF9O43307 516 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 IDH3BO43837 385 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 FRAT2O75474 233 aaPredicted RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 HPRP00739 348 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 CCDC159P0C7I6 412 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 CCND2P30279 289 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 PRDX2P32119 198 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 RPL9P32969 192 aaKnown RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 ZNF131P52739 623 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 PEX3P56589 373 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 FKBP3Q00688 224 aaKnown RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 ZKSCAN8Q15776 578 aaPredicted RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 DNAJC21Q5F1R6 531 aaKnown RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 IL23RQ5VWK5 629 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 WDR25Q64LD2 544 aaPredicted RBP4.9□□□□□ -1.63
VPS50-212ENST00000476413 RAET1GQ6H3X3 334 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 RHBDD2Q6NTF9 364 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 LRRTM1Q86UE6 522 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 LINC00518Q8N0U6 118 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 OR1K1Q8NGR3 316 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 TMEM37Q8WXS4 190 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 NLNQ9BYT8 704 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 NMNAT2Q9BZQ4 307 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 TMEM231Q9H6L2 316 aa4.9□□□□□ -1.63
VPS50-212ENST00000476413 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.89□□□□□ -1.63
VPS50-212ENST00000476413 NEDD8-MDP1E9PL57 170 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 ARF4P18085 180 aaPredicted RBP4.89□□□□□ -1.63
VPS50-212ENST00000476413 IL4RP24394 825 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 IRX1P78414 480 aaPredicted RBP4.89□□□□□ -1.63
VPS50-212ENST00000476413 MYBPC1Q00872 1141 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 PMP22Q01453 160 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 NAAAQ02083 359 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 SNX1Q13596 522 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 INAQ16352 499 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 HKDC1Q2TB90 917 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 LDLRAP1Q5SW96 308 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 LMNTD2Q8IXW0 634 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 ZNF397Q8NF99 534 aaPredicted RBP4.89□□□□□ -1.63
VPS50-212ENST00000476413 MOCOSQ96EN8 888 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 CCDC51Q96ER9 411 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 ECT2Q9H8V3 914 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 DEPPQ9NTK1 212 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 THYN1Q9P016 225 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 ZNF175Q9Y473 711 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 KLF2Q9Y5W3 355 aaPredicted RBP4.89□□□□□ -1.63
VPS50-212ENST00000476413 ATP8B3O60423 1300 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms