RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 STAG3L4Q8TBR4 150 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 NRGNQ92686 78 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 TANKQ92844 425 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 NINJ1Q92982 152 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 RBM18Q96H35 190 aaKnown RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 SENP5Q96HI0 755 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 FBXL20Q96IG2 436 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 CNPPD1Q9BV87 410 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 SORBS1Q9BX66 1292 aaKnown RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 CXXC4Q9H2H0 198 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 OR51B5Q9H339 312 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 ALG9Q9H6U8 611 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 EXO5Q9H790 373 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 RPF2Q9H7B2 306 aaKnown RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 PROK2Q9HC23 129 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 ZFP64Q9NPA5 681 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 SAYSD1Q9NPB0 183 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 MS4A12Q9NXJ0 267 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 QPCTLQ9NXS2 382 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 SPRR3Q9UBC9 169 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 B4GALT7Q9UBV7 327 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 ADGRE2Q9UHX3 823 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 BOKQ9UMX3 212 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 PCDHGB3Q9Y5G1 929 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 SAR1BQ9Y6B6 198 aa6.63□□□□□ -1.35
UBE4B-208ENST00000475795 CHCHD2Q9Y6H1 151 aaPredicted RBP6.63□□□□□ -1.35
UBE4B-208ENST00000475795 FAM221AA4D161 298 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 LRRC3CA6NJW4 275 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SUPT3HB4E1H0 165 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 K7EPI3 171 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 UBXN8O00124 270 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SAP18O00422 153 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PLPP1O14494 284 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 KERAO60938 352 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SUPT3HO75486 399 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PRKRAO75569 313 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 CTAG2O75638 210 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GSTA2P09210 222 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 RFPL3SP0C7P2 107 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SLC35E2BP0CK96 405 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ALOX15P16050 662 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SERPINB3P29508 390 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 TLX1P31314 330 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GPC1P35052 558 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SPRP35270 261 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GMPRP36959 345 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PEX19P40855 299 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PIK3CBP42338 1070 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PAFAH1B1P43034 410 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 RAP1GDS1P52306 607 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ARFIP1P53367 373 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 HNRNPH2P55795 449 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GPX6P59796 221 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 HERVK_113P63132 956 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ERVK-8P63133 956 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 KCNJ2P63252 427 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 DLG1Q12959 904 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SLAMF1Q13291 335 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 DDX39BQ13838 428 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 NTRK2Q16620 822 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SPRED3Q2MJR0 410 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GRTP1Q5TC63 336 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PRAMEF20Q5VT98 475 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 C18orf63Q68DL7 685 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 RNF111Q6ZNA4 994 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 C3orf62Q6ZUJ4 267 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SLC29A4Q7RTT9 530 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 WDR53Q7Z5U6 358 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 CMC1Q7Z7K0 106 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ISCA2Q86U28 154 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GPR180Q86V85 440 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 CTAGE3PQ8IX95 158 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ZZZ3Q8IYH5 903 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ULK2Q8IYT8 1036 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ST13P4Q8IZP2 240 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 LRRC25Q8N386 305 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 RNF175Q8N4F7 328 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 FAM13CQ8NE31 585 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 OR10G3Q8NGC4 313 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 HUS1BQ8NHY5 278 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 NEIL3Q8TAT5 605 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 RGMAQ96B86 450 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PPWD1Q96BP3 646 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 GAL3ST4Q96RP7 486 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ATOH8Q96SQ7 321 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 NAPGQ99747 312 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 FOXC2Q99958 501 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 PELOQ9BRX2 385 aaKnown RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 CENPKQ9BS16 269 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ERVK-6Q9BXR3 956 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ZNF717Q9BY31 904 aaPredicted RBP6.62□□□□□ -1.35
UBE4B-208ENST00000475795 WWTR1Q9GZV5 400 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SLC6A15Q9H2J7 730 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 NMRAL1Q9HBL8 299 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 ACKR4Q9NPB9 350 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 DMRT3Q9NQL9 472 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
UBE4B-208ENST00000475795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms