RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GCGRP47871 477 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 FAM53BQ14153 422 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 TRIP6Q15654 476 aaKnown RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 RUNDC3AQ59EK9 446 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 LRIF1Q5T3J3 769 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 OR51Q1Q8NH59 317 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 OR10A6Q8NH74 314 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 STARD8Q92502 1023 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 PPWD1Q96BP3 646 aaKnown RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 MTERF3Q96E29 417 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 HOPXQ9BPY8 73 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 NDC1Q9BTX1 674 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 ROGDIQ9GZN7 287 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 COL5A1P20908 1838 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 COL27A1Q8IZC6 1860 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 NSA2O95478 260 aaKnown RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 ZNF28P17035 718 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 RPL5P46777 297 aaKnown RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 ANXA8L1Q5VT79 327 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 SHISA6Q6ZSJ9 500 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 VPS37AQ8NEZ2 397 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 ZNF681Q96N22 645 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 AMDHD1Q96NU7 426 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 BBS4Q96RK4 519 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 PTTG2Q9NZH5 202 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 CD300AQ9UGN4 299 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 BTNL2Q9UIR0 455 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 C15orf38-AP3S2A0A0A6YYH1 394 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 SOAT1P35610 550 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 XCR1P46094 333 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 HSPA13P48723 471 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 XKP51811 444 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 EFNA3P52797 238 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 RPS26P62854 115 aaKnown RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 LIPEQ05469 1076 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 LRRC36Q1X8D7 754 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 VWA2Q5GFL6 755 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 COX20Q5RI15 118 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 LCN10Q6JVE6 187 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 ANGPTL8Q6UXH0 198 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 ARPINQ7Z6K5 226 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 OR9A2Q8NGT5 310 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 KAT2AQ92830 837 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 DPH2Q9BQC3 489 aaPredicted RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 LYRM4Q9HD34 91 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 GPATCH2Q9NW75 528 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 PHF11Q9UIL8 331 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 RARRES3Q9UL19 164 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 TEX51A0A1B0GUA7 166 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 GUCY1B2O75343 617 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 ERN1O75460 977 aaKnown RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 RFPL3O75679 317 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 SCRG1O75711 98 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 NCK1P16333 377 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 MAOAP21397 527 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 PPP2R1BP30154 601 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 AVPR1BP47901 424 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 ACY1Q03154 408 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 FAM214AQ32MH5 1076 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 FAM69BQ5VUD6 431 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 GARNL3Q5VVW2 1013 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 DGAT2L6Q6ZPD8 337 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 PIP4P1Q86T03 277 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 BMPERQ8N8U9 685 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 OTUB1Q96FW1 271 aaPredicted RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 SLC7A5P2Q9GIP4 190 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 FANCEQ9HB96 536 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 SIRT3Q9NTG7 399 aaPredicted RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 TAS2R9Q9NYW1 312 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 ABCD2Q9UBJ2 740 aa17■□□□□ 0.31
ATG4B-217ENST00000475693 WBP11Q9Y2W2 641 aaKnown RBP17■□□□□ 0.31
ATG4B-217ENST00000475693 CLIC1O00299 241 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 LRP3O75074 770 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 NUDT7P0C024 238 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 SMIM18P0DKX4 95 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 RPL3P39023 403 aaKnown RBP16.99■□□□□ 0.31
ATG4B-217ENST00000475693 ETV5P41161 510 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 RAB38P57729 211 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 OR4D2P58180 307 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 GRAMD1BQ3KR37 738 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATG4B-217ENST00000475693 SZRD1Q7Z422 152 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 LAPTM4BQ86VI4 370 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 ANKRD9Q96BM1 317 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-217ENST00000475693 CPPED1Q9BRF8 314 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-217ENST00000475693 TPT1P8Q9HAU6 139 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 SLC22A11Q9NSA0 550 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 TAS2R7Q9NYW3 318 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 TRPC4Q9UBN4 977 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 PCDHGB4Q9UN71 923 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 CCDC88CQ9P219 2028 aa16.99■□□□□ 0.31
ATG4B-217ENST00000475693 A0A1W2PNU3 283 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-217ENST00000475693 MSL3P1P0C860 447 aa16.98■□□□□ 0.31
ATG4B-217ENST00000475693 TLX1P31314 330 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-217ENST00000475693 GSK3BP49841 420 aa16.98■□□□□ 0.31
ATG4B-217ENST00000475693 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
ATG4B-217ENST00000475693 CYP2R1Q6VVX0 501 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms