RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 DEFB110Q30KQ9 67 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZNF100Q8IYN0 542 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 LRRC25Q8N386 305 aaPredicted RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 TRIB2Q92519 343 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 AKAP1Q92667 903 aaKnown RBP eCLIP10.5□□□□□ -0.734e-9■■■■■ 30.8
VAPB-204ENST00000475243 FAM46AQ96IP4 442 aaKnown RBP10.5□□□□□ -0.73
VAPB-204ENST00000475243 ZNF778Q96MU6 729 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 MTMR10Q9NXD2 777 aa10.5□□□□□ -0.73
VAPB-204ENST00000475243 EEF1E1O43324 174 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 LAMTOR5O43504 91 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 FASLGP48023 281 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 ZNF33AQ06730 810 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 IGFN1Q86VF2 1251 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 OR52B6Q8NGF0 335 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 OR52P1PQ8NH57 321 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 PGAM5Q96HS1 289 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 DOHHQ9BU89 302 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 XYLT2Q9H1B5 865 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TMEM59LQ9UK28 342 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 ZNF840PA6NDX5 716 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 C6P13671 934 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TIA1P31483 386 aaKnown RBP eCLIP10.49□□□□□ -0.73
VAPB-204ENST00000475243 TUBA1BP68363 451 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TUBA4AP68366 448 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 OR4D1Q15615 310 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TMEM69Q5SWH9 247 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.49□□□□□ -0.733e-9■■■■■ 28.9
VAPB-204ENST00000475243 TUBA1AQ71U36 451 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 WDTC1Q8N5D0 677 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 OR52E2Q8NGJ4 325 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 OR56A3Q8NH54 315 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 YTHDF1Q9BYJ9 559 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 C5AR2Q9P296 337 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 HSPB11Q9Y547 144 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 ZNF35P13682 527 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 ETFAP13804 333 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TAS2R43P59537 309 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 AIMP2Q13155 320 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 UBE2UQ5VVX9 321 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 GID4Q8IVV7 300 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 SLC25A44Q96H78 314 aaPredicted RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 A0A0U1RQS6 177 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 UNC119BA6NIH7 251 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 MAS1P04201 325 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 ZXDBP98169 803 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 MVKQ03426 396 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 KCNAB2Q13303 367 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 CDNFQ49AH0 187 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 EIF5AL1Q6IS14 154 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 ZNF773Q6PK81 442 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TMPRSS12Q86WS5 348 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TMEM151AQ8N4L1 468 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TCEAL3Q969E4 200 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 BACE2Q9Y5Z0 518 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TP53I11O14683 189 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TOXO94900 526 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 GSTT2P0CG29 244 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TUBA3EQ6PEY2 450 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 AMIGO3Q86WK7 504 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 SCGB1C1Q8TD33 95 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 EXOSC1Q9Y3B2 195 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 CHD2O14647 1828 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 HTRA2O43464 458 aaPredicted RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 ALDOAP04075 364 aaKnown RBP10.49□□□□□ -0.73
VAPB-204ENST00000475243 GGT2P36268 569 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 FOXK1P85037 733 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 DHCR24Q15392 516 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 UNC50Q53HI1 259 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 SHFQ7M4L6 423 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 KLBQ86Z14 1044 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 TMEM151BQ8IW70 566 aa10.49□□□□□ -0.73
VAPB-204ENST00000475243 A0A096LPI6 279 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 EMC8O43402 210 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 CNOT4O95628 575 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 DOC2AQ14183 400 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 GBX1Q14549 363 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ELAVL3Q14576 367 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 CST6Q15828 149 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RAB6CQ53S08 254 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 OR4C11Q6IEV9 310 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 TRMT10AQ8TBZ6 339 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 DAZLQ92904 295 aaKnown RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 TMEM68Q96MH6 324 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RAB6CQ9H0N0 254 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 CLEC4EQ9ULY5 219 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 PCDHGB6Q9Y5F9 930 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.48□□□□□ -0.73
VAPB-204ENST00000475243 RAB28P51157 221 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 NTHL1P78549 312 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 TUBA3CQ13748 450 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 FCRLBQ6BAA4 426 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 OR6Q1Q8NGQ2 317 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 ZUFSPQ96AP4 578 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 TGM5O43548 720 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 IL1RNP18510 177 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 DPP6P42658 865 aa10.48□□□□□ -0.73
VAPB-204ENST00000475243 MAGEA3P43357 314 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms