RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 C1QAP02745 245 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 AHSGP02765 367 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 HPNP05981 417 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 C1GALT1C1LP0DN25 315 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 PGAM1P18669 254 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 GNAZP19086 355 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 TNNI3P19429 210 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 HPDP32754 393 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC6A12P48065 614 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 KCNC1P48547 511 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 CDK9P50750 372 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF75DP51815 510 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 MTTPP55157 894 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 IGLV3-21P80748 117 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 RCN2Q14257 317 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 NTRK2Q16620 822 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 NHSL2Q5HYW2 709 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 FNDC7Q5VTL7 733 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 BICRALQ6AI39 1079 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 VASNQ6EMK4 673 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 TTC27Q6P3X3 843 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM40Q6P9F5 258 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 DGAT2L6Q6ZPD8 337 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 YTHDF3Q7Z739 585 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 GALNT7Q86SF2 657 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 DND1Q8IYX4 353 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 RASGEF1CQ8N431 466 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC15A4Q8N697 577 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 C9orf106Q8NAJ2 232 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 PPP1R14CQ8TAE6 165 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 MAIP1Q8WWC4 291 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 PIGTQ969N2 578 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 GTPBP3Q969Y2 492 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 ISL2Q96A47 359 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 ANKRD9Q96BM1 317 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 NTNG2Q96CW9 530 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 WDYHV1Q96HA8 205 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SENP5Q96HI0 755 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 FBXL20Q96IG2 436 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 JSRP1Q96MG2 331 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 KCNC2Q96PR1 638 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIB1Q96RU8 372 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 BAG1Q99933 345 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 MAPKAP1Q9BPZ7 522 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 RBM24Q9BX46 236 aaKnown RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 UGT2B28Q9BY64 529 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 WWTR1Q9GZV5 400 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 COPS7BQ9H9Q2 264 aaPredicted RBP4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 CALHM2Q9HA72 323 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 LYRM4Q9HD34 91 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC17A6Q9P2U8 582 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 CAMK2AQ9UQM7 478 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC6A5Q9Y345 797 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 TESMINQ9Y4I5 508 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 IKBKGQ9Y6K9 419 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 NINQ8N4C6 2090 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 NPEPPSL1A6NEC2 478 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ANKDD1BA6NHY2 528 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 DEFB108AA8MXU0 73 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 CDC7O00311 574 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 RTCAO00442 366 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 PRAMEF4O60810 478 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 H2AFYO75367 372 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ERN1O75460 977 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 CRLF1O75462 422 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 BANF1O75531 89 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TRAPPC6AO75865 159 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 WDR47O94967 919 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 SCELO95171 688 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ACSL3O95573 720 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TTC4O95801 387 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 KRT14P02533 472 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TMIGD3P0DMS9 266 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 COX7A2P14406 83 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF37AP17032 561 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 BMP7P18075 431 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 CD22P20273 847 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 SERPINB3P29508 390 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 SOX18P35713 384 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 GDF5P43026 501 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 MSH2P43246 934 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 SLCO1A2P46721 670 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 STT3AP46977 705 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 CPA2P48052 419 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 HNMTP50135 292 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 CDKL1Q00532 357 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 PLIN5Q00G26 463 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TGM3Q08188 693 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 FOXF2Q12947 444 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF460Q14592 562 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 EBPQ15125 230 aaKnown RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 RPS6KA2Q15349 733 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 SF3B4Q15427 424 aaKnown RBP eCLIP4.68□□□□□ -1.664e-6■■■■□ 20.9
SNRNP40-204ENST00000474025 C18orf21Q32NC0 220 aaPredicted RBP4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TBCELQ5QJ74 424 aa4.68□□□□□ -1.66
SNRNP40-204ENST00000474025 TEDDM1Q5T9Z0 273 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms