RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MAP2K2P36507 400 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ZFP36L2P47974 494 aaKnown RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TRPC1P48995 793 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 LIMK2P53671 638 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ERVK-16P61578 105 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 HERVK_113P63132 956 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ERVK-8P63133 956 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CSNK2BP67870 215 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 RBBP4Q09028 425 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ANKDD1AQ495B1 522 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TMEM41BQ5BJD5 291 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 LDLRAP1Q5SW96 308 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CES4AQ5XG92 561 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF730Q6ZMV8 503 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 SMIM29Q86T20 159 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF573Q86YE8 665 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 APLFQ8IW19 511 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CENPLQ8N0S6 344 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF540Q8NDQ6 660 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 GMCL1P1Q8NEA9 526 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 DDHD1Q8NEL9 900 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 FBXO30Q8TB52 745 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 MRPL53Q96EL3 112 aaKnown RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 PCED1BQ96HM7 432 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 USP28Q96RU2 1077 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CLEC7AQ9BXN2 247 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ERVK-6Q9BXR3 956 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 DGCR6LQ9BY27 220 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 FNDC4Q9H6D8 234 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 SP140LQ9H930 580 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 MED20Q9H944 212 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ACTR8Q9H981 624 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CENPMQ9NSP4 180 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 TECRQ9NZ01 308 aaKnown RBP3.68□□□□□ -1.82
BRCA1-212ENST00000473961 LHX3Q9UBR4 397 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 IKBKGQ9Y6K9 419 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 CSNK1G3Q9Y6M4 447 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 ZMYM4Q5VZL5 1548 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 KDM5BQ9UGL1 1544 aa3.68□□□□□ -1.82
BRCA1-212ENST00000473961 RAPGEF2Q9Y4G8 1499 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 EIF3AQ14152 1382 aaKnown RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 DOCK7Q96N67 2140 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 TOP2AP11388 1531 aaKnown RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 HHLA1C9JL84 531 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 MPHOSPH10O00566 681 aaKnown RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 E2F3O00716 465 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF195O14628 629 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 LRCH4O75427 683 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 IGLV2-11P01706 119 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 KRT8P05787 483 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 FCER2P06734 321 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 FCGR2BP31994 310 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 FCGR2CP31995 323 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 NDST1P52848 882 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 BACE1P56817 501 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 DHODHQ02127 395 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 SYCP1Q15431 976 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 HAGHQ16775 308 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 WSCD2Q2TBF2 565 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 ZNF876PQ49A33 203 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 LIPJQ5W064 366 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 BSPRYQ5W0U4 402 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 PPP1R42Q7Z4L9 355 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 PTAR1Q7Z6K3 402 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 RANBP3LQ86VV4 465 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 AMZ2Q86W34 360 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 GPBP1Q86WP2 473 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 TBC1D10CQ8IV04 446 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 OR10T2Q8NGX3 314 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 MRPL24Q96A35 216 aaKnown RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 AZIN2Q96A70 460 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 PNPLA2Q96AD5 504 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 C16orf58Q96GQ5 468 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 GMPPAQ96IJ6 420 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-212ENST00000473961 ANKRD27Q96NW4 1050 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 NDUFAF3Q9BU61 184 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 CCSER1Q9C0I3 900 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 WDR13Q9H1Z4 485 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 B3GAT2Q9NPZ5 323 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 GTSE1Q9NYZ3 720 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 TMOD2Q9NZR1 351 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 ATXN10Q9UBB4 475 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 DUSP12Q9UNI6 340 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 KIAA1107Q9UPP5 1409 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 SPATA31D1Q6ZQQ2 1576 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 PLEKHH2Q8IVE3 1493 aa3.67□□□□□ -1.82
BRCA1-212ENST00000473961 SYNJ2BP-COX16A0A087WUM0 186 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 A0A1W2PR80 420 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 SHISA7A6NL88 538 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 PDXKO00764 312 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 KCNAB3O43448 404 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TNFSF12O43508 249 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 GMFGO60234 142 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 TSPAN2O60636 221 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 PCCBP05166 539 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 THRBP10828 461 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 FUT1P19526 365 aa3.66□□□□□ -1.82
BRCA1-212ENST00000473961 CYP2F1P24903 491 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms