RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 PDE7AQ13946 482 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 CEBPEQ15744 281 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 SPRED3Q2MJR0 410 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 LSM12Q3MHD2 195 aaKnown RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 H3F3CQ6NXT2 135 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ACAD11Q709F0 780 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 R3HCC1LQ7Z5L2 792 aaKnown RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 RIMKLAQ8IXN7 391 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 LRRC25Q8N386 305 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 KRTCAP2Q8N6L1 136 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 RFWD2Q8NHY2 731 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 SLC2A12Q8TD20 617 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 DOK4Q8TEW6 326 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF721Q8TF20 911 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 NCLNQ969V3 563 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 PPCDCQ96CD2 204 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 THOC1Q96FV9 657 aaKnown RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 WBP1Q96G27 269 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ABHD17AQ96GS6 310 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF764Q96H86 408 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 BBS4Q96RK4 519 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 NUDT9Q9BW91 350 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 OR8D2Q9GZM6 311 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ADNPQ9H2P0 1102 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF552Q9H707 407 aaPredicted RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 CXorf21Q9HAI6 301 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 KCNK13Q9HB14 408 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 GIMAP4Q9NUV9 329 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 SH3BP4Q9P0V3 963 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
PRKCB-205ENST00000472066 MAP1BP46821 2468 aaKnown RBP11.49□□□□□ -0.57
PRKCB-205ENST00000472066 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 A8MUI8 341 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 HRKO00198 91 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 SCAMP2O15127 329 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 CT62P0C5K7 136 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 PCSK2P16519 638 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 HPCAL1P37235 193 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 RPL3P39023 403 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 GYS2P54840 703 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 C21orf58P58505 322 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 MGAT2Q10469 447 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 MAP4K2Q12851 820 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF267Q14586 743 aaPredicted RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 MPEG1Q2M385 716 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 PRICKLE4Q2TBC4 344 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF385BQ569K4 471 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 AGAP7PQ5VUJ5 663 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 IRAK1BP1Q5VVH5 260 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 TMEM198Q66K66 360 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 PCSK4Q6UW60 755 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 FAM9CQ8IZT9 166 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF321PQ8N8H1 164 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 OR1N1Q8NGS0 311 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 SUN3Q8TAQ9 357 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 BRIX1Q8TDN6 353 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 NUDT8Q8WV74 236 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 COQ8BQ96D53 544 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 VMP1Q96GC9 406 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 FBXL20Q96IG2 436 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 AGAP4Q96P64 663 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF317Q96PQ6 595 aaPredicted RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 EBF4Q9BQW3 602 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 CCDC28BQ9BUN5 200 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 SLC25A23Q9BV35 468 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 NPHS2Q9NP85 383 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 TCF7L2Q9NQB0 619 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 FGFR1OP2Q9NVK5 253 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 AIG1Q9NVV5 245 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 FAM53CQ9NYF3 392 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 PTGFRNQ9P2B2 879 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ZNF223Q9UK11 482 aaPredicted RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 G3BP2Q9UN86 482 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 ENTPD4Q9Y227 616 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 PCDHGA9Q9Y5G4 932 aaKnown RBP11.48□□□□□ -0.57
PRKCB-205ENST00000472066 GPR45Q9Y5Y3 372 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 NUP210LQ5VU65 1888 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 NBEAQ8NFP9 2946 aa11.48□□□□□ -0.57
PRKCB-205ENST00000472066 TRBV11-1A0A0K0K1C0 115 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 K7EM74 188 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 ANKRD28O15084 1053 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 UBDO15205 165 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 POLR3GO15318 223 aaPredicted RBP11.47□□□□□ -0.57
PRKCB-205ENST00000472066 KLHL41O60662 606 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 DDX5P17844 614 aaKnown RBP11.47□□□□□ -0.57
PRKCB-205ENST00000472066 S1PR1P21453 382 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 PTGER1P34995 402 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 SOX18P35713 384 aa11.47□□□□□ -0.57
PRKCB-205ENST00000472066 CLCN2P51788 898 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms