RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 ATP1B1P05026 303 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 PRPS2P11908 318 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 RPL3P39023 403 aaKnown RBP14.09□□□□□ -0.15
SNX13-205ENST00000471744 GPR143P51810 404 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 KLRB1Q12918 225 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 MEP1AQ16819 746 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 CRLF3Q8IUI8 442 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 FAM9CQ8IZT9 166 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 LRRC25Q8N386 305 aaPredicted RBP14.09□□□□□ -0.15
SNX13-205ENST00000471744 FNDC5Q8NAU1 212 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 OR1N1Q8NGS0 311 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 CDC26Q8NHZ8 85 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 SLC2A12Q8TD20 617 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 RIT1Q92963 219 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 FBXL20Q96IG2 436 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 C3orf30Q96M34 536 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 C7orf26Q96N11 449 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 RNF32Q9H0A6 362 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 MEAF6Q9HAF1 191 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 PNPOQ9NVS9 261 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 TAS2R7Q9NYW3 318 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 ANAPC2Q9UJX6 822 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 MAPRE3Q9UPY8 281 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
SNX13-205ENST00000471744 ATMQ13315 3056 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 TRBV11-1A0A0K0K1C0 115 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 MYOCOSA0A1B0GUC4 107 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 DYTNA2CJ06 578 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 WASHC1A8K0Z3 465 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 A8MUI8 341 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 ZFAND5O76080 213 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 DDAH2O95865 285 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 PDGFAP04085 211 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 BCKDHAP12694 445 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 SDC1P18827 310 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 EMX2Q04743 252 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 ACER2Q5QJU3 275 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 R3HCC1LQ7Z5L2 792 aaKnown RBP14.08□□□□□ -0.16
SNX13-205ENST00000471744 RPS19BP1Q86WX3 136 aaKnown RBP14.08□□□□□ -0.16
SNX13-205ENST00000471744 GALNT12Q8IXK2 581 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 MMP21Q8N119 569 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 ARMC10Q8N2F6 343 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 TEX19Q8NA77 164 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 OR5L2Q8NGL0 311 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 PIWIL2Q8TC59 973 aaKnown RBP14.08□□□□□ -0.16
SNX13-205ENST00000471744 UCN3Q969E3 161 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 MTERF3Q96E29 417 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 SENP5Q96HI0 755 aaPredicted RBP14.08□□□□□ -0.16
SNX13-205ENST00000471744 MAGEB18Q96M61 343 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 NUF2Q9BZD4 464 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 CXorf21Q9HAI6 301 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 SLC35C2Q9NQQ7 365 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 ASIC5Q9NY37 505 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 NOP53Q9NZM5 478 aaKnown RBP14.08□□□□□ -0.16
SNX13-205ENST00000471744 NBEAQ8NFP9 2946 aa14.08□□□□□ -0.16
SNX13-205ENST00000471744 OR6C76A6NM76 312 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 K7EM74 188 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 FCHO1O14526 889 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 TBX19O60806 448 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 IGKV3-11P04433 115 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 NT5EP21589 574 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 NTSP30990 170 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 MPIP34949 423 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 FEN1P39748 380 aaKnown RBP14.07□□□□□ -0.16
SNX13-205ENST00000471744 ERVK-8P63133 956 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 NFATC3Q12968 1075 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 ZNF267Q14586 743 aaPredicted RBP14.07□□□□□ -0.16
SNX13-205ENST00000471744 CEBPEQ15744 281 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 LINC00696Q6ZRV3 163 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 TICAM1Q8IUC6 712 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 KIF2BQ8N4N8 673 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 ZNF721Q8TF20 911 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 CKAP2Q8WWK9 683 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 HAS2Q92819 552 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 EXOSC8Q96B26 276 aaKnown RBP14.07□□□□□ -0.16
SNX13-205ENST00000471744 PPWD1Q96BP3 646 aaKnown RBP14.07□□□□□ -0.16
SNX13-205ENST00000471744 ERP27Q96DN0 273 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 CNRIP1Q96F85 164 aaPredicted RBP14.07□□□□□ -0.16
SNX13-205ENST00000471744 ZNF681Q96N22 645 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 TSSK3Q96PN8 268 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 CNPPD1Q9BV87 410 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 REEP4Q9H6H4 257 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 AKTIPQ9H8T0 292 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 STMN3Q9NZ72 180 aa14.07□□□□□ -0.16
SNX13-205ENST00000471744 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 SLITRK5O94991 958 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 JUNP05412 331 aaKnown RBP14.06□□□□□ -0.16
SNX13-205ENST00000471744 KITP10721 976 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 LBPP18428 481 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 TACR1P25103 407 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 HPCAL1P37235 193 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 CASRP41180 1078 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 MLF1P58340 268 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 ARG2P78540 354 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 FUT7Q11130 342 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 MAP4K2Q12851 820 aa14.06□□□□□ -0.16
SNX13-205ENST00000471744 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms