RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TTC26A0AVF1 554 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TRIM64A6NGJ6 449 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TRIM64BA6NI03 449 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 GLOD5A6NK44 160 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 LRRIQ3A6PVS8 624 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 H0YAE9 185 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 IDH3BO43837 385 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 ERAL1O75616 437 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 KRT33AO76009 404 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 IGHV2-70P01814 119 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 CXCL10P02778 98 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TPM1P09493 284 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 DLATP10515 647 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 GHRP10912 638 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TNNI1P19237 187 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 PRKACGP22612 351 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 CD52P31358 61 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 RFC2P35250 354 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 ATP6V1E1P36543 226 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TNFSF9P41273 254 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 KLC1Q07866 573 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 SCARB2Q14108 478 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 EFTUD2Q15029 972 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 EXOC3L4Q17RC7 722 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 LRRC26Q2I0M4 334 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 UGT3A2Q3SY77 523 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 MOGAT2Q3SYC2 334 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 C1orf220Q5T0J3 134 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 KRT39Q6A163 491 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TWF2Q6IBS0 349 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 UGT3A1Q6NUS8 523 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 RPUSD3Q6P087 351 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF343Q6P1L6 599 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 ALKAL1Q6UXT8 129 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 WDR49Q8IV35 697 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 LMNTD2Q8IXW0 634 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 ARL10Q8N8L6 244 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TDRD5Q8NAT2 981 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 SEPT8Q92599 483 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 SLC22A18Q96BI1 424 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 CCDC127Q96BQ5 260 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 SPDL1Q96EA4 605 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 OPA3Q9H6K4 179 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 CHST11Q9NPF2 352 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 PFDN4Q9NQP4 134 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 RGS18Q9NS28 235 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 NDE1Q9NXR1 346 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 CPSF2Q9P2I0 782 aaKnown RBP4.57□□□□□ -1.68
CCDC39-202ENST00000471307 IL17BQ9UHF5 180 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TBX21Q9UL17 535 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 COQ4Q9Y3A0 265 aa4.57□□□□□ -1.68
CCDC39-202ENST00000471307 TRIP11Q15643 1979 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TIMP1P01033 207 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TNNC2P02585 160 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 QDPRP09417 244 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 HAPLN1P10915 354 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GP1BBP13224 206 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 ATP6V1B1P15313 513 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 KCNE1P15382 129 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 CYP3A5P20815 502 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 RBMS1P29558 406 aaKnown RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 ATP5DP30049 168 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TSFMP43897 325 aaKnown RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GCLMP48507 274 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 CDH13P55290 713 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 OSTNP61366 133 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 MYL7Q01449 175 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 HSPB3Q12988 150 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GPNMBQ14956 572 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 SYCP1Q15431 976 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 ZBTB6Q15916 424 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 XKR4Q5GH76 650 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 C11orf88Q6PI97 169 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GPRIN3Q6ZVF9 776 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 SLC24A5Q71RS6 500 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TMPRSS11BQ86T26 416 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 CDR2LQ86X02 465 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 NDUFAF2Q8N183 169 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 Q8N377 158 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 AVL9Q8NBF6 648 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 KCTD6Q8NC69 237 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 FBXL13Q8NEE6 735 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF397Q8NF99 534 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 NEK11Q8NG66 645 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 OR2L2Q8NH16 312 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 APOBEC4Q8WW27 367 aaKnown RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 RSPH1Q8WYR4 309 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TAF4BQ92750 862 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 ANKRD36BP1Q96IX9 119 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 PRICKLE1Q96MT3 831 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GBP5Q96PP8 586 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TMEM117Q9H0C3 514 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC39-202ENST00000471307 RAB20Q9NX57 234 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 GDE1Q9NZC3 331 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 MTRRQ9UBK8 725 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 FBXL5Q9UKA1 691 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 PADI2Q9Y2J8 665 aa4.56□□□□□ -1.68
CCDC39-202ENST00000471307 TET1Q8NFU7 2136 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 BRCA2P51587 3418 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms