RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 GID4Q8IVV7 300 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF679Q8IYX0 411 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LINC00471Q8N535 108 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NEIL3Q8TAT5 605 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM234Q8WY98 164 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SPOCK2Q92563 424 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TXNDC15Q96J42 360 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 RXFP3Q9NSD7 469 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 KLHL9Q9P2J3 617 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 POLLQ9UGP5 575 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GJD2Q9UKL4 321 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ACSL6Q9UKU0 697 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ASB3Q9Y575 518 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LOC102723532A0A0G2JNH3 316 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 FAM221BA6H8Z2 402 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 FADS1O60427 444 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CD79AP11912 226 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 FBLP22087 321 aaKnown RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PLCXD2Q0VAA5 305 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PMPCAQ10713 525 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 STK11Q15831 433 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GRIK5Q16478 980 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 DPY19L1Q2PZI1 675 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NADK2Q4G0N4 442 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 C4orf17Q53FE4 359 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 BRICD5Q6PL45 260 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CARM1Q86X55 608 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CMIPQ8IY22 773 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CMTM1Q8IZ96 169 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 MAPK15Q8TD08 544 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SLC35F5Q8WV83 523 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PSMG2Q969U7 264 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PLD4Q96BZ4 506 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 POTEKPQ9BYX7 375 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CLDND1Q9NY35 253 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SARDHQ9UL12 918 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GOLT1BQ9Y3E0 138 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 HAS3O00219 553 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TERTO14746 1132 aaKnown RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 OR2B3O76000 313 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ESR1P03372 595 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 OR10J4P0C629 311 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SOX3P41225 446 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TGFBIQ15582 683 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NNATQ16517 81 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LTC4SQ16873 150 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SLC36A3Q495N2 470 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 FSTL4Q6MZW2 842 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ASRGL1Q7L266 308 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TSPAN33Q86UF1 283 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PYURFQ96I23 114 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TESQ9UGI8 421 aaKnown RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 KCNK6Q9Y257 313 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PIGBOS1A0A0B4J2F0 54 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SERPINE2P07093 398 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 ADORA3P0DMS8 318 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 EDN3P14138 238 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RPL17P18621 184 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 S100A7P31151 101 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 GABRA3P34903 492 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 APLNRP35414 380 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 MAP2K4P45985 399 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HOXA1P49639 335 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 VSX2P58304 361 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 HERVK_113P63132 956 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PPP2CAP67775 309 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DEFA6Q01524 100 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 TAF9Q16594 264 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KHDC1Q4VXA5 237 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 C9orf152Q5JTZ5 239 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 RBMXL3Q8N7X1 1067 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 OR4K15Q8NH41 348 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CNOT9Q92600 299 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 MCHR1Q99705 422 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PSD2Q9BQI7 771 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CCDC32Q9BV29 185 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DHX33Q9H6R0 707 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SYNPO2LQ9H987 977 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KCNJ16Q9NPI9 418 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PRTFDC1Q9NRG1 225 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 AK9Q5TCS8 1911 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 CRYM-AS1A6NIL9 109 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 SLC38A8A6NNN8 435 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 NUDT21O43809 227 aaKnown RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 GLSO94925 669 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-210ENST00000471181 PBX2P40425 430 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 MAP2K3P46734 347 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 OR1E2P47887 323 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 DGKQP52824 942 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 KIAA0895LQ68EN5 471 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 NIPA1Q7RTP0 329 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 GPR142Q7Z601 462 aa6.61□□□□□ -1.35
BRCA1-210ENST00000471181 LRRTM4Q86VH4 590 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms