RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ERV3-1Q14264 604 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 MPEG1Q2M385 716 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 RABL3Q5HYI8 236 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 C3orf38Q5JPI3 329 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 TMEM107Q6UX40 140 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 TMEM64Q6YI46 380 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 QSOX2Q6ZRP7 698 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SLCO6A1Q86UG4 719 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 GALNT12Q8IXK2 581 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SLC15A3Q8IY34 581 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 PRSS58Q8IYP2 241 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ST13P4Q8IZP2 240 aaPredicted RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 CACTIN-AS1Q8N1I8 211 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 RNF148Q8N7C7 305 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 OR9A2Q8NGT5 310 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 OR5AK3PQ8NH89 298 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SFXN5Q8TD22 340 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 RIT1Q92963 219 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 UCN3Q969E3 161 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 TMEM125Q96AQ2 219 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 FKBP10Q96AY3 582 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ZNF578Q96N58 590 aaPredicted RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 LRFN5Q96NI6 719 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SPATA9Q9BWV2 254 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ALOXE3Q9BYJ1 711 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ALG2Q9H553 416 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 THUMPD1Q9NXG2 353 aaKnown RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 PTGFRNQ9P2B2 879 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ABCD2Q9UBJ2 740 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 MKL2Q9ULH7 1088 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 FAF1Q9UNN5 650 aaPredicted RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 PADI2Q9Y2J8 665 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 RRP15Q9Y3B9 282 aaKnown RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 OTOGLQ3ZCN5 2332 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 VPS13AQ96RL7 3174 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 RALGAPA1Q6GYQ0 2036 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 UNC13CQ8NB66 2214 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 COQ9O75208 318 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 BCAS2O75934 225 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 STK17BO94768 372 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 MAOAP21397 527 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 MAGEA8P43361 318 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 STT3AP46977 705 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CDK9P50750 372 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 CLDN6P56747 220 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CORO7P57737 925 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 TXNL4AP83876 142 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 TARDBPQ13148 414 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCM2-204ENST00000470837 FADDQ13158 208 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 FLOT2Q14254 428 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 NSDHLQ15738 373 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CEBPEQ15744 281 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 ZNF750Q32MQ0 723 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 GTDC1Q4AE62 458 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 PIGGQ5H8A4 983 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 C8orf82Q6P1X6 216 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 ERICH5Q6P6B1 374 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 OVCH1Q7RTY7 1134 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 C6orf120Q7Z4R8 191 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 NET1Q7Z628 596 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 ZC3H7AQ8IWR0 971 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 TMEM52Q8NDY8 209 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 OR2T12Q8NG77 320 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 OR52N2Q8NGI0 321 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 OR10A6Q8NH74 314 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 PSMA8Q8TAA3 256 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 PNPT1Q8TCS8 783 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 ZFP90Q8TF47 636 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 STMN2Q93045 179 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 ANKRD9Q96BM1 317 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 NEURL3Q96EH8 262 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 RNF31Q96EP0 1072 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 AURKBQ96GD4 344 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 SLC35G5Q96KT7 338 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 ZNF681Q96N22 645 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CPPED1Q9BRF8 314 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 MUC13Q9H3R2 512 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CXorf36Q9H7Y0 433 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 SLAMF7Q9NQ25 335 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 PNO1Q9NRX1 252 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 CMTM6Q9NX76 183 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 SLC25A37Q9NYZ2 338 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 SUCOQ9UBS9 1254 aaKnown RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 C19orf25Q9UFG5 118 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 PADI1Q9ULC6 663 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 SATB2Q9UPW6 733 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 TMEM184BQ9Y519 407 aaPredicted RBP9.16□□□□□ -0.94
CCM2-204ENST00000470837 PCDHGA3Q9Y5H0 932 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 B3GALT1Q9Y5Z6 326 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 CLCA3PQ9Y6N3 262 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 ASXL3Q9C0F0 2248 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 RP1P56715 2156 aa9.16□□□□□ -0.94
CCM2-204ENST00000470837 TRBV5-3A0A0A0MS03 114 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 258.4 ms