RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 ZNF473Q8WTR7 871 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TANKQ92844 425 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PPWD1Q96BP3 646 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CMTM7Q96FZ5 175 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 FBXL20Q96IG2 436 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 ZNF597Q96LX8 424 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PELOQ9BRX2 385 aaKnown RBP12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 LRRC1Q9BTT6 524 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 SH2D2AQ9NP31 389 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 PHF11Q9UIL8 331 aa12.76□□□□□ -0.37
SEMA3F-208ENST00000470737 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 AHRRA9YTQ3 701 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 SAP18O00422 153 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 TP53I11O14683 189 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 PHGDHO43175 533 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 TRAPPC6AO75865 159 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 IGKV3-11P04433 115 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 CD1DP15813 335 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 STMN1P16949 149 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 TACR1P25103 407 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 BUD31P41223 144 aaPredicted RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 PLTPP55058 493 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 HERVK_113P63132 956 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ERVK-8P63133 956 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 MRPS25P82663 173 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 SLAMF1Q13291 335 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 OR4D1Q15615 310 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 KHDRBS2Q5VWX1 349 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 OR4C11Q6IEV9 310 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ADGRD1Q6QNK2 874 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ZDHHC24Q6UX98 284 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 UBE3DQ7Z6J8 389 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 KIF18BQ86Y91 864 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 RELL1Q8IUW5 271 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 LACC1Q8IV20 430 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 PM20D2Q8IYS1 436 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ST13P4Q8IZP2 240 aaPredicted RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 RELL2Q8NC24 303 aaPredicted RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 OR10G3Q8NGC4 313 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 DIO2Q92813 273 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 RGMAQ96B86 450 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 HSPBAP1Q96EW2 488 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ERVK-6Q9BXR3 956 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 CD244Q9BZW8 370 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ZDHHC18Q9NUE0 388 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ZNF629Q9UEG4 869 aaPredicted RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ADGRE2Q9UHX3 823 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 CBLCQ9ULV8 474 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 ERVK-19Q9WJR5 959 aa12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
SEMA3F-208ENST00000470737 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 LRRC3CA6NJW4 275 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 OR6C76A6NM76 312 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 LRATO95237 230 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 EPPINO95925 133 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 RAF1P04049 648 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 CASP2P42575 452 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 MASP1P48740 699 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 RPP38P78345 283 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 PHEXP78562 749 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 TNFRSF17Q02223 184 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 DUSP8Q13202 625 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 DDX39BQ13838 428 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 KEAP1Q14145 624 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 ZNF267Q14586 743 aaPredicted RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 FBXL19-AS1Q494R0 122 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 ACSF3Q4G176 576 aaPredicted RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 LYPD8Q6UX82 237 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 PAMR1Q6UXH9 720 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 GPR180Q86V85 440 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 LAS2Q8IYD9 372 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 MMP21Q8N119 569 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 TNIP2Q8NFZ5 429 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 MBD6Q96DN6 1003 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 CPNE1Q99829 537 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 MCMBPQ9BTE3 642 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 WWTR1Q9GZV5 400 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 OR51B5Q9H339 312 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 WDR41Q9HAD4 459 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 OPTCQ9UBM4 332 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 PTBP2Q9UKA9 531 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 CAMK2AQ9UQM7 478 aa12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 CHCHD2Q9Y6H1 151 aaPredicted RBP12.74□□□□□ -0.37
SEMA3F-208ENST00000470737 SUPT3HB4E1H0 165 aa12.73□□□□□ -0.37
SEMA3F-208ENST00000470737 HRKO00198 91 aa12.73□□□□□ -0.37
SEMA3F-208ENST00000470737 SUPT3HO75486 399 aa12.73□□□□□ -0.37
SEMA3F-208ENST00000470737 C1QAP02745 245 aa12.73□□□□□ -0.37
SEMA3F-208ENST00000470737 CEACAM8P31997 349 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms