RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PCDHGA6Q9Y5G7 932 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 A3GALT2U3KPV4 340 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 NOTCH4Q99466 2003 aa7.59□□□□□ -1.19
SMC4-212ENST00000470240 PNMA8CA0A1B0GUJ8 204 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 IGLON5A6NGN9 336 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 PDZK1P1A8MUH7 402 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 PCDHGA12O60330 932 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 WBP4O75554 376 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 H1F0P07305 194 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 NR2F1P10589 423 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 NDUFS1P28331 727 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CMPK1P30085 196 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 OPRL1P41146 370 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 IL12RB1P42701 662 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TSFMP43897 325 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 OR1E2P47887 323 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 GSSP48637 474 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CCT3P49368 545 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 RAB28P51157 221 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 HMGA2P52926 109 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 METAP1P53582 386 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 MVDP53602 400 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CRISP1P54107 249 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CRISP3P54108 245 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CASP9P55211 416 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 LSM3P62310 102 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 RPS21P63220 83 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 PRR5P85299 388 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 ITGADQ13349 1161 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 AQP6Q13520 282 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TP53BP2Q13625 1128 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 RUNX3Q13761 415 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 C1DQ13901 141 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 SLC9A5Q14940 896 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 IQCCQ4KMZ1 466 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TOR1AIP1Q5JTV8 583 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 PIP5KL1Q5T9C9 394 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 MEDAGQ5VYS4 303 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 OR4C11Q6IEV9 310 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TNFAIP8L2Q6P589 184 aaPredicted RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 VITQ6UXI7 678 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CASP12Q6UXS9 341 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TMEM64Q6YI46 380 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 ZNF852Q6ZMS4 543 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 DCDC5Q6ZRR9 648 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 FAM83HQ6ZRV2 1179 aaPredicted RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 C6orf120Q7Z4R8 191 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 FAM124AQ86V42 546 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CACTIN-AS1Q8N1I8 211 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CENPSQ8N2Z9 138 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 OR56A1Q8NGH5 318 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 OR2L8Q8NGY9 312 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 RHOXF1Q8NHV9 184 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 ZNF675Q8TD23 568 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 DNASE1L2Q92874 299 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 FGF13Q92913 245 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 LGALS12Q96DT0 336 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 OTUB1Q96FW1 271 aaPredicted RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 TMEM19Q96HH6 336 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 ZFYVE19Q96K21 471 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 ZNF354BQ96LW1 612 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 F2RL3Q96RI0 385 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CSF3RQ99062 836 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 MYOCQ99972 504 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TEX101Q9BY14 249 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 UCK2Q9BZX2 261 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 LMAN2LQ9H0V9 348 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 RSPH9Q9H1X1 276 aaPredicted RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 MMP27Q9H306 513 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CXorf36Q9H7Y0 433 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 C3orf14Q9HBI5 128 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 MRPS30Q9NP92 439 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 FBXO8Q9NRD0 319 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 IMP3Q9NV31 184 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 GIN1Q9NXP7 522 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CALML5Q9NZT1 146 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 CCDC59Q9P031 241 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 TRPC4Q9UBN4 977 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 EXO1Q9UQ84 846 aaKnown RBP7.58□□□□□ -1.2
SMC4-212ENST00000470240 PRKAB1Q9Y478 270 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 STON1Q9Y6Q2 735 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 COLEC10Q9Y6Z7 277 aa7.58□□□□□ -1.2
SMC4-212ENST00000470240 TCF20Q9UGU0 1960 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRAMEF33A0A0G2JMD5 474 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 H3BN98 237 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 H7BY64 318 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 J3QRK9 145 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 TLR4O00206 839 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 CASC3O15234 703 aaKnown RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 MID1O15344 667 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 OR10H3O60404 316 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 FOXD2O60548 495 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 PRAMEF10O60809 474 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 PIPP12273 146 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 ACP5P13686 325 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 OSMP13725 252 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 GSTM3P21266 225 aa7.57□□□□□ -1.2
SMC4-212ENST00000470240 ZNF10P21506 573 aaPredicted RBP7.57□□□□□ -1.2
SMC4-212ENST00000470240 CDH3P22223 829 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms