RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 RGMAQ96B86 450 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 NXNL1Q96CM4 212 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TSPAN17Q96FV3 270 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 FBXL20Q96IG2 436 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 GNRHR2Q96P88 292 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ATOH8Q96SQ7 321 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 TIMP4Q99727 224 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 CPNE1Q99829 537 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 DOHHQ9BU89 302 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF717Q9BY31 904 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-204ENST00000469207 WWTR1Q9GZV5 400 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 IGSF5Q9NSI5 407 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ARHGAP21Q5T5U3 1957 aa11.26□□□□□ -0.61
HDAC3-204ENST00000469207 ACANP16112 2415 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 HRNRQ86YZ3 2850 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 FAM159BA6NKW6 160 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 K7EPI3 171 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 PGRMC2O15173 223 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 GPR75O95800 540 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 EPPINO95925 133 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 CT62P0C5K7 136 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 SLC35E2BP0CK96 405 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 GDF1P27539 372 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 BSGP35613 385 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 GP5P40197 560 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 RAP1GDS1P52306 607 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 GNG11P61952 73 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 IRF9Q00978 393 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 TNFRSF17Q02223 184 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 EBPQ15125 230 aaKnown RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 TRADDQ15628 312 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 KRTAP21-3Q3LHN1 58 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 KBTBD12Q3ZCT8 623 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 FNDC7Q5VTL7 733 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 FAM219BQ5XKK7 198 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 MRM1Q6IN84 353 aaKnown RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 GRHL2Q6ISB3 625 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 RNF111Q6ZNA4 994 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 RAPH1Q70E73 1250 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 LRRC70Q7Z2Q7 622 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 PRR22Q8IZ63 422 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 ST13P4Q8IZP2 240 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 MMP21Q8N119 569 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 LIX1Q8N485 282 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 SLC15A4Q8N697 577 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 STAG3L4Q8TBR4 150 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 DIO2Q92813 273 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 RIT1Q92963 219 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 UBE2E3Q969T4 207 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 SH3GL2Q99962 352 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 DMRT3Q9NQL9 472 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 TXNDC16Q9P2K2 825 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 OPTCQ9UBM4 332 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 CBLCQ9ULV8 474 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 BOKQ9UMX3 212 aaPredicted RBP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 SAR1BQ9Y6B6 198 aa11.25□□□□□ -0.61
HDAC3-204ENST00000469207 NIPBLQ6KC79 2804 aaeCLIP11.25□□□□□ -0.61
HDAC3-204ENST00000469207 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 A6NNC1 897 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 HSPB2A8KAH6 182 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 OR10H2O60403 315 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 EPB42P16452 691 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 SERPINB3P29508 390 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 CEACAM8P31997 349 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-204ENST00000469207 ZNF136P52737 540 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 ADAM8P78325 824 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 PLIN5Q00G26 463 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 CRYZQ08257 329 aaKnown RBP11.24□□□□□ -0.61
HDAC3-204ENST00000469207 CBLBQ13191 982 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 HSPB2Q16082 182 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 NTRK2Q16620 822 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 EIPR1Q53HC9 387 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 DCST1Q5T197 706 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 TMEM198Q66K66 360 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 PLXDC2Q6UX71 529 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-204ENST00000469207 ZCCHC7Q8N3Z6 543 aaKnown RBP11.24□□□□□ -0.61
HDAC3-204ENST00000469207 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 CDKL2Q92772 493 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 NINJ1Q92982 152 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
HDAC3-204ENST00000469207 SMR3AQ99954 134 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 MS4A12Q9NXJ0 267 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 GRHL1Q9NZI5 618 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 NUDT4Q9NZJ9 180 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 CNIH4Q9P003 139 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
HDAC3-204ENST00000469207 ABCA4P78363 2273 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 A0A0A6YYD5 115 aa11.23□□□□□ -0.61
HDAC3-204ENST00000469207 C2orf92A0A1B0GVN3 265 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms