RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PRMT9Q6P2P2 845 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ERICH5Q6P6B1 374 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ZNF614Q8N883 585 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ZNF555Q8NEP9 628 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 HUS1BQ8NHY5 278 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 KLHL6Q8WZ60 621 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 TRMT61BQ9BVS5 477 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 ZBTB20Q9HC78 741 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 PPM1DO15297 605 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 ECDO95905 644 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 C9P02748 559 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SDC1P18827 310 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 CSNK1DP48730 415 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SLC14A2Q15849 920 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 RBM48Q5RL73 367 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 MPP7Q5T2T1 576 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 OR8K5Q8NH50 307 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 BTN2A2Q8WVV5 523 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 TFGQ92734 400 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 ARRDC3Q96B67 414 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 GDF15Q99988 308 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 LGR4Q9BXB1 951 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 NUSAP1Q9BXS6 441 aaKnown RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 RACGAP1Q9H0H5 632 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 NKX2-4Q9H2Z4 354 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 CCM2LQ9NUG4 571 aaPredicted RBP11.76□□□□□ -0.53
USP11-206ENST00000469080 GMPPBQ9Y5P6 360 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 TSC2P49815 1807 aa11.76□□□□□ -0.53
USP11-206ENST00000469080 SPTBN5Q9NRC6 3674 aaKnown RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 GNB5O14775 395 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 PCDH7O60245 1069 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 ETHE1O95571 254 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 FABP1P07148 127 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 JUPP14923 745 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 AOAHP28039 575 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 PRKAR1BP31321 381 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 SSTP61278 116 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 ZNF45Q02386 682 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 EMX1Q04741 257 aaPredicted RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 LTB4RQ15722 352 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 IQCCQ4KMZ1 466 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 USP39Q53GS9 565 aaKnown RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 ZNF425Q6IV72 752 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 GPR153Q6NV75 609 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 LRFN4Q6PJG9 635 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 Q6ZPB1 254 aaPredicted RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 CELF5Q8N6W0 485 aaKnown RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 TMEM145Q8NBT3 493 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 TADA1Q96BN2 335 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 F2RL3Q96RI0 385 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 POPDC3Q9HBV1 291 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 TINAGQ9UJW2 476 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 HSPE1-MOB4S4R3N1 261 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 AHCTF1Q8WYP5 2266 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 PRKRAO75569 313 aaKnown RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 CD36P16671 472 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 NUDT6P53370 316 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 SLC14A1Q13336 389 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 TOMM20Q15388 145 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 SHHQ15465 462 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 ARMCX4Q5H9R4 360 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 LILRA6Q6PI73 481 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 BTN2A1Q7KYR7 527 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 WDR53Q7Z5U6 358 aaPredicted RBP11.75□□□□□ -0.53
USP11-206ENST00000469080 ZDHHC21Q8IVQ6 265 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 AMER2Q8N7J2 671 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 VN1R2Q8NFZ6 395 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 ZNF385DQ9H6B1 395 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 TM9SF3Q9HD45 589 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 FBXW2Q9UKT8 454 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
USP11-206ENST00000469080 C6orf47O95873 294 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 PRNPP04156 253 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 HTR1AP08908 422 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 SLC35G4P0C7Q5 338 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 MYL9P24844 172 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 CAPN13Q6MZZ7 669 aaPredicted RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 WDR48Q8TAF3 677 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 XAGE5Q8WWM1 108 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 GTPBP3Q969Y2 492 aaKnown RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 ACTL8Q9H568 366 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 KAT8Q9H7Z6 458 aaKnown RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 AGPAT4Q9NRZ5 378 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 SH2B3Q9UQQ2 575 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
USP11-206ENST00000469080 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 PRAMEF4O60810 478 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 CREG1O75629 220 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 NFATC1O95644 943 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 RNF224P0DH78 156 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 SUOXP51687 545 aa11.74□□□□□ -0.53
USP11-206ENST00000469080 ARFIP1P53367 373 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms