RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NAT8LQ8N9F0 302 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 OR5J2Q8NH18 312 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 GATAD2BQ8WXI9 593 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 LRIG1Q96JA1 1093 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 DCSTAMPQ9H295 470 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 MYNNQ9NPC7 610 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 IL1R2P27930 398 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 POU4F2Q12837 409 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 OLIG2Q13516 323 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 LRRC26Q2I0M4 334 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TMEM107Q6UX40 140 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 DPY19L3Q6ZPD9 716 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 LANCL3Q6ZV70 420 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TMEM110Q86TL2 294 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 LRRC57Q8N9N7 239 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ANKK1Q8NFD2 765 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 PITX2Q99697 317 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TREX2Q9BQ50 279 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 POPDC3Q9HBV1 291 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ABRACLQ9P1F3 81 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ZDHHC2Q9UIJ5 367 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 A0A0G2JPF8 293 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 C1orf226A1L170 272 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 HNRNPCL3B7ZW38 293 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 HHLA1C9JL84 531 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 PMM2O15305 246 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 HNRNPCL4P0DMR1 293 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CD9P21926 228 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CHRNB4P30926 498 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 APLNRP35414 380 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ACTC1P68032 377 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ACTA1P68133 377 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ARG2P78540 354 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CD83Q01151 205 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 RSU1Q15404 277 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 BCL2L15Q5TBC7 163 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 HMBOX1Q6NT76 420 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 SLC15A3Q8IY34 581 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 PACRGLQ8N7B6 248 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TXNDC5Q8NBS9 432 aaKnown RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 SHISA4Q96DD7 197 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 WACQ9BTA9 647 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CADM1Q9BY67 442 aaKnown RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 MYH8P13535 1937 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 PRSS51A0A1B0GVH4 220 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 NPC1O15118 1278 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 SSX5O60225 188 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 MT-ND2P03891 347 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 NPR2P20594 1047 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 TNFSF4P23510 183 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 EPHA4P54764 986 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 EMX2Q04743 252 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 RBPJQ06330 500 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 ABHD18Q0P651 414 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 CLCA4Q14CN2 919 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 HSD17B12Q53GQ0 312 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 C10orf62Q5T681 223 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 MEDAGQ5VYS4 303 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 NLGN4YQ8NFZ3 816 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 POC1BQ8TC44 478 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 GLYATL1Q969I3 302 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 SLC25A44Q96H78 314 aaPredicted RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 EBF4Q9BQW3 602 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 FBRSQ9HAH7 460 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 WDR6Q9NNW5 1121 aaKnown RBP8.34□□□□□ -1.07
HPS4-209ENST00000466781 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 OAZ3Q9UMX2 235 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 OARD1Q9Y530 152 aa8.34□□□□□ -1.07
HPS4-209ENST00000466781 LSM1O15116 133 aaKnown RBP8.33□□□□□ -1.08
HPS4-209ENST00000466781 SHOXO15266 292 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 C1GALT1C1LP0DN25 315 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 GLDCP23378 1020 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 POU3F4P49335 361 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 ACADVLP49748 655 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 GSTM4Q03013 218 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 NNATQ16517 81 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 C22orf15Q8WYQ4 148 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 FAM3CQ92520 227 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 RAB8BQ92930 207 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 KIAA1191Q96A73 305 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 TOX2Q96NM4 488 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 ZNF559Q9BR84 538 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 YTHDF1Q9BYJ9 559 aaKnown RBP8.33□□□□□ -1.08
HPS4-209ENST00000466781 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 GPRC5BQ9NZH0 403 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 IL20RAQ9UHF4 553 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 LCHNA4D1U4 455 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 PHYHO14832 338 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 ZNF623O75123 536 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 GCH1P30793 250 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 LCN1P31025 176 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 PTGR1Q14914 329 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 ANKDD1AQ495B1 522 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 CARM1Q86X55 608 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 TMIEQ8NEW7 156 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 OR2T33Q8NG76 320 aa8.33□□□□□ -1.08
HPS4-209ENST00000466781 OR51G2Q8NGK0 314 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms